RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
SSR4-208ENST00000471880 LAMTOR4Q0VGL1 99 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 HAUS3Q68CZ6 603 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 CMTR2Q8IYT2 770 aaKnown RBP16.49■□□□□ 0.23
SSR4-208ENST00000471880 RNF149Q8NC42 400 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 PLXNA4Q9HCM2 1894 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 RWDD3Q9Y3V2 267 aa16.49■□□□□ 0.23
SSR4-208ENST00000471880 MRPL42Q9Y6G3 142 aaKnown RBP16.49■□□□□ 0.23
SSR4-208ENST00000471880 ARHGEF35A5YM69 484 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 C9IYK1 514 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
SSR4-208ENST00000471880 DGAT1O75907 488 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 PHKA2P46019 1235 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 TFDP1Q14186 410 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 PTPROQ16827 1216 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 LONRF3Q496Y0 759 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 RILPL1Q5EBL4 403 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 EP400NLQ6ZTU2 488 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 CRIPAKQ8N1N5 446 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 SNX29Q8TEQ0 813 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 RC3H2Q9HBD1 1191 aaKnown RBP16.48■□□□□ 0.23
SSR4-208ENST00000471880 DACT1Q9NYF0 836 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
SSR4-208ENST00000471880 ERLIN2O94905 339 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 LYPLA2O95372 231 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 POU3F3P20264 500 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 BMPR1AP36894 532 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 RARRES1P49788 294 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 DSC3Q14574 896 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 DTHD1Q6ZMT9 781 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 POLR3CQ9BUI4 534 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 COL25A1Q9BXS0 654 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 POLR3FQ9H1D9 316 aaPredicted RBP16.47■□□□□ 0.23
SSR4-208ENST00000471880 TMEM161AQ9NX61 479 aa16.47■□□□□ 0.23
SSR4-208ENST00000471880 H3BNC9 293 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 INO80B-WBP1J3KQ70 363 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 ASAP2O43150 1006 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
SSR4-208ENST00000471880 SPATA31C1P0DKV0 1188 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 FXR2P51116 673 aaKnown RBP eCLIP16.46■□□□□ 0.23
SSR4-208ENST00000471880 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
SSR4-208ENST00000471880 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 KRT79Q5XKE5 535 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 ECHDC2Q86YB7 292 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
SSR4-208ENST00000471880 LRRIQ4A6NIV6 560 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 PP2D1A8MPX8 630 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 LAD1O00515 517 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 DLL1O00548 723 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 HOXA2O43364 376 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 PDCP20941 246 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 RPA1P27694 616 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 NCBP1Q09161 790 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 FAM43BQ6ZT52 329 aaPredicted RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 SRGAP1Q7Z6B7 1085 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 C4orf32Q8N8J7 132 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 HELQQ8TDG4 1101 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 IFT122Q9HBG6 1241 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 AAASQ9NRG9 546 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
SSR4-208ENST00000471880 KIAA1024Q9UPX6 916 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
SSR4-208ENST00000471880 VWA3AA6NCI4 1184 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 RB1P06400 928 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
SSR4-208ENST00000471880 LIG1P18858 919 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 CDC25AP30304 524 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 CUL4AQ13619 759 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 PADI6Q6TGC4 694 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 HSCBQ8IWL3 235 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 THNSL1Q8IYQ7 743 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 LPPQ93052 612 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 CDK5RAP3Q96JB5 506 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 TMEM117Q9H0C3 514 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 MINDY3Q9H8M7 445 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 LMCD1Q9NZU5 365 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 INPP5FQ9Y2H2 1132 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
SSR4-208ENST00000471880 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
SSR4-208ENST00000471880 GRM6O15303 877 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSR4-208ENST00000471880 SKIP12755 728 aa16.43■□□□□ 0.22
SSR4-208ENST00000471880 FAM189BP81408 668 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms