RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CIITAP33076 1130 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 DDIT3P35638 169 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 TECP42680 631 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 CLCN3P51790 818 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 PLPP4Q5VZY2 271 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 LRRC55Q6ZSA7 311 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 REXO1Q8N1G1 1221 aaKnown RBP10.21□□□□□ -0.77
SF3A1-206ENST00000471037 METTL13Q8N6R0 699 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 CCDC12Q8WUD4 166 aaPredicted RBP10.21□□□□□ -0.77
SF3A1-206ENST00000471037 PHKBQ93100 1093 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 LENG9Q96B70 501 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF558Q96NG5 402 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 MAP7D2Q96T17 732 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 PPP1R16BQ96T49 567 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 ADAMTS10Q9H324 1103 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 ENTPD7Q9NQZ7 604 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 TCEAL9Q9UHQ7 104 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 WDR64B1ANS9 1081 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 FDPSP14324 419 aaKnown RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 ZSCAN20P17040 1043 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 TMOD1P28289 359 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 NUBP1P53384 320 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 VCPP55072 806 aaKnown RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 NUCB2P80303 420 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 KRT17Q04695 432 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 LARP1BQ659C4 914 aaKnown RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 ECHDC2Q86YB7 292 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 ABI1Q8IZP0 508 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 FAM177A1Q8N128 213 aaPredicted RBP10.2□□□□□ -0.78
SF3A1-206ENST00000471037 RSPH1Q8WYR4 309 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 CASP10Q92851 521 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 IRF2BPLQ9H1B7 796 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 ZDBF2Q9HCK1 2354 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 SPG21Q9NZD8 308 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 GABBR1Q9UBS5 961 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 NR2E1Q9Y466 385 aa10.2□□□□□ -0.78
SF3A1-206ENST00000471037 EVPLQ92817 2033 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 A0A0U1RQF3 1178 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 ADAMTS3O15072 1205 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 ZNF862O60290 1169 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 EOMESO95936 686 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 OATP04181 439 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 DARSP14868 501 aaKnown RBP10.19□□□□□ -0.78
SF3A1-206ENST00000471037 XBP1P17861 261 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 GNA11P29992 359 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 AVPR2P30518 371 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 PBX3P40426 434 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 GPC3P51654 580 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 ITIH3Q06033 890 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 TRIM29Q14134 588 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 SMC1AQ14683 1233 aaKnown RBP10.19□□□□□ -0.78
SF3A1-206ENST00000471037 TPRNQ4KMQ1 711 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 PRR16Q569H4 304 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 EFCAB12Q6NXP0 572 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 LLGL2Q6P1M3 1020 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 TMC7Q7Z402 723 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
SF3A1-206ENST00000471037 SLC39A11Q8N1S5 342 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 LRRC71Q8N4P6 559 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 MRPL43Q8N983 215 aaKnown RBP10.19□□□□□ -0.78
SF3A1-206ENST00000471037 C8orf76Q96K31 380 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 NECTIN4Q96NY8 510 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 MRPL9Q9BYD2 267 aaKnown RBP10.19□□□□□ -0.78
SF3A1-206ENST00000471037 CHMP5Q9NZZ3 219 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 HCFC2Q9Y5Z7 792 aa10.19□□□□□ -0.78
SF3A1-206ENST00000471037 MYH9P35579 1960 aaKnown RBP10.18□□□□□ -0.78
SF3A1-206ENST00000471037 CARNS1A5YM72 827 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 C2orf71A6NGG8 1288 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 STX6O43752 255 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 SYT1P21579 422 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 SFNP31947 248 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 PRKCEQ02156 737 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 TRMT1LQ7Z2T5 733 aaKnown RBP10.18□□□□□ -0.78
SF3A1-206ENST00000471037 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 BICD2Q8TD16 824 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 RIPOR3Q96MK2 946 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 RIT2Q99578 217 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 TRAIPQ9BWF2 469 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 ADAM7Q9H2U9 754 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 POMKQ9H5K3 350 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 SH3GLB2Q9NR46 395 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 NRBP2Q9NSY0 501 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 DACT1Q9NYF0 836 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 SORCS3Q9UPU3 1222 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 IRAK3Q9Y616 596 aa10.18□□□□□ -0.78
SF3A1-206ENST00000471037 USP34Q70CQ2 3546 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 C2CD4DB7Z1M9 353 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 H3BQV1 296 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 MSH4O15457 936 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 EDIL3O43854 480 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 DTNBO60941 627 aa10.17□□□□□ -0.78
SF3A1-206ENST00000471037 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
SF3A1-206ENST00000471037 ALDH7A1P49419 539 aaKnown RBP10.17□□□□□ -0.78
SF3A1-206ENST00000471037 JAK3P52333 1124 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms