RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ASAP2O43150 1006 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 MED24O75448 989 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 SPATA31C1P0DKV0 1188 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 XRCC6P12956 609 aaKnown RBP eCLIP17.49■□□□□ 0.39
HDAC6-218ENST00000470942 SPOUT1Q5T280 376 aaKnown RBP17.49■□□□□ 0.39
HDAC6-218ENST00000470942 CATSPER4Q7RTX7 472 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 RNF169Q8NCN4 708 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 CLP1Q92989 425 aaKnown RBP17.49■□□□□ 0.39
HDAC6-218ENST00000470942 POLR3CQ9BUI4 534 aaPredicted RBP17.49■□□□□ 0.39
HDAC6-218ENST00000470942 ELAC1Q9H777 363 aaKnown RBP17.49■□□□□ 0.39
HDAC6-218ENST00000470942 DACT1Q9NYF0 836 aa17.49■□□□□ 0.39
HDAC6-218ENST00000470942 DGAT1O75907 488 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 LINC00271P0C7V0 271 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 FGFR1P11362 822 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 RARRES1P49788 294 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■■□□□ 12.9
HDAC6-218ENST00000470942 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 ECHDC2Q86YB7 292 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 NACC1Q96RE7 527 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-218ENST00000470942 IFT122Q9HBG6 1241 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 XPNPEP1Q9NQW7 623 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 LRWD1Q9UFC0 647 aa17.48■□□□□ 0.39
HDAC6-218ENST00000470942 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
HDAC6-218ENST00000470942 C5orf67F2Z3F1 127 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 DLL1O00548 723 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 HOXA2O43364 376 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 USO1O60763 962 aaKnown RBP17.47■□□□□ 0.39
HDAC6-218ENST00000470942 RPA1P27694 616 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 CCT6AP40227 531 aaKnown RBP17.47■□□□□ 0.39
HDAC6-218ENST00000470942 HAUS3Q68CZ6 603 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 TWF2Q6IBS0 349 aaKnown RBP17.47■□□□□ 0.39
HDAC6-218ENST00000470942 POTEGQ6S5H5 508 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 SRGAP1Q7Z6B7 1085 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 RNF149Q8NC42 400 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 MRPL38Q96DV4 380 aaKnown RBP17.47■□□□□ 0.39
HDAC6-218ENST00000470942 PLVAPQ9BX97 442 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
HDAC6-218ENST00000470942 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
HDAC6-218ENST00000470942 A0A0U1RQF3 1178 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 LAD1O00515 517 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 PHKA2P46019 1235 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 CUL4AQ13619 759 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 TFDP1Q14186 410 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 PDIA5Q14554 519 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-218ENST00000470942 MAEAQ7L5Y9 396 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 ABI1Q8IZP0 508 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 ATXN2LQ8WWM7 1075 aaKnown RBP17.46■□□□□ 0.39
HDAC6-218ENST00000470942 TMEM117Q9H0C3 514 aa17.46■□□□□ 0.39
HDAC6-218ENST00000470942 ALG13Q9NP73 1137 aaKnown RBP17.46■□□□□ 0.39
HDAC6-218ENST00000470942 DBR1Q9UK59 544 aaKnown RBP17.46■□□□□ 0.39
HDAC6-218ENST00000470942 GRM6O15303 877 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 CSPG5O95196 566 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 EOMESO95936 686 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
HDAC6-218ENST00000470942 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-218ENST00000470942 MINDY3Q9H8M7 445 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 AAASQ9NRG9 546 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 TYW1Q9NV66 732 aaKnown RBP17.45■□□□□ 0.38
HDAC6-218ENST00000470942 PCDHB12Q9Y5F1 795 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 STK24Q9Y6E0 443 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 MYO7AQ13402 2215 aa17.45■□□□□ 0.38
HDAC6-218ENST00000470942 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 SKIP12755 728 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 MUTP22033 750 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 ARL2P36404 184 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 PRPHP41219 470 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 TIGD5Q53EQ6 642 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 NAALADL2Q58DX5 795 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 TJAP1Q5JTD0 557 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 KLHL23Q8NBE8 558 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 P2RX5Q93086 422 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 HLA-CQ95604 372 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 CASD1Q96PB1 797 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 LMAN2LQ9H0V9 348 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 AGPAT5Q9NUQ2 364 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 HCSTQ9UBK5 93 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 COG5Q9UP83 839 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 PLAGL2Q9UPG8 496 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 ATG2AQ2TAZ0 1938 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 PLXNA4Q9HCM2 1894 aa17.44■□□□□ 0.38
HDAC6-218ENST00000470942 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-218ENST00000470942 INO80B-WBP1J3KQ70 363 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 ERLIN2O94905 339 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 GLRA2P23416 452 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 PTENP60484 403 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 TFF2Q03403 129 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 CAPSQ13938 189 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 IL17AQ16552 155 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 ECM1Q16610 540 aa17.43■□□□□ 0.38
HDAC6-218ENST00000470942 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms