RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 TDP2O95551 362 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ATP5OP48047 213 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 RFX6Q8HWS3 928 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SCYL3Q8IZE3 742 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 MCPH1Q8NEM0 835 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CCT6BQ92526 530 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM4Q9C037 500 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 RBM12Q9NTZ6 932 aaKnown RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 KBTBD4Q9NVX7 518 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 MAP3K7O43318 606 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 RTN2O75298 545 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TPD52P55327 224 aaPredicted RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ARL4CP56559 192 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 RASA3Q14644 834 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ZNF564Q8TBZ8 553 aaPredicted RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM55Q9BYV6 548 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TMEM260Q9NX78 707 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 PKD1L3Q7Z443 1732 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ACSL3O95573 720 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SLC12A2P55011 1212 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 GUCY1A3Q02108 690 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CTTNQ14247 550 aaKnown RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ANKRD36BP1Q96IX9 119 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 MYMKA6NI61 221 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SNAP23O00161 211 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 PHF2O75151 1096 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SMIM24O75264 130 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CALB1P05937 261 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 UCHL3P15374 230 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 VAMP7P51809 220 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 MRPS25P82663 173 aaKnown RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 GRIN1Q05586 938 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 SEC23AQ15436 765 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 RASIP1Q5U651 963 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 EPM2AIP1Q7L775 607 aaPredicted RBP11.28□□□□□ -0.6
RRP1B-202ENST00000470886 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 CEP170P1Q96L14 293 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 USP21Q9UK80 565 aa11.28□□□□□ -0.6
RRP1B-202ENST00000470886 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 A0A0G2JLW4 131 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 P4HA2O15460 535 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ZWINTO95229 277 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 PSAPP07602 524 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ESRRAP11474 423 aaPredicted RBP11.27□□□□□ -0.6
RRP1B-202ENST00000470886 CCND2P30279 289 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 AGPAT1Q99943 283 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 ANAPC7Q9UJX3 599 aa11.27□□□□□ -0.6
RRP1B-202ENST00000470886 RASA4BC9J798 803 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
RRP1B-202ENST00000470886 RASA4O43374 803 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 KRT37O76014 449 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 ACTN1P12814 892 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
RRP1B-202ENST00000470886 NPEPPSP55786 919 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 GLG1Q92896 1179 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 ANKZF1Q9H8Y5 726 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 STK32BQ9NY57 414 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 TRIM10Q9UDY6 481 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 PRDM4Q9UKN5 801 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 ARL2BPQ9Y2Y0 163 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 ALS2Q96Q42 1657 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 KIAA0391O15091 583 aaKnown RBP11.27□□□□□ -0.61
RRP1B-202ENST00000470886 BAG2O95816 211 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 FTLP02792 175 aaPredicted RBP11.27□□□□□ -0.61
RRP1B-202ENST00000470886 BRAFP15056 766 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 NPR1P16066 1061 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 TBXAS1P24557 533 aaPredicted RBP11.27□□□□□ -0.61
RRP1B-202ENST00000470886 SFNP31947 248 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 EPHA7Q15375 998 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 PTGISQ16647 500 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
RRP1B-202ENST00000470886 LRRC10BA6NIK2 292 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 OPHN1O60890 802 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
RRP1B-202ENST00000470886 ITIH2P19823 946 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
RRP1B-202ENST00000470886 LRRC31Q6UY01 552 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms