RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 MXD4Q14582 209 aaPredicted RBP15.75■□□□□ 0.11
TOP3B-215ENST00000470338 ECM1Q16610 540 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 EPC2Q52LR7 807 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 DTHD1Q6ZMT9 781 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 SRGAP1Q7Z6B7 1085 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 TMEM192Q8IY95 271 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 CMTR2Q8IYT2 770 aaKnown RBP15.75■□□□□ 0.11
TOP3B-215ENST00000470338 CLP1Q92989 425 aaKnown RBP15.75■□□□□ 0.11
TOP3B-215ENST00000470338 NLRP4Q96MN2 994 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 ATP6V0A4Q9HBG4 840 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 CHST12Q9NRB3 414 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 TMEM161AQ9NX61 479 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 LMCD1Q9NZU5 365 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 LRFN2Q9ULH4 789 aa15.75■□□□□ 0.11
TOP3B-215ENST00000470338 A0A0C4DFX4 3053 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 SRGAP2CP0DJJ0 459 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 SYT1P21579 422 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 SFPQP23246 707 aaKnown RBP eCLIP15.74■□□□□ 0.11
TOP3B-215ENST00000470338 CCT6AP40227 531 aaKnown RBP15.74■□□□□ 0.11
TOP3B-215ENST00000470338 BTG3Q14201 252 aaPredicted RBP15.74■□□□□ 0.11
TOP3B-215ENST00000470338 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
TOP3B-215ENST00000470338 FBXO22Q8NEZ5 403 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 GDPD5Q8WTR4 605 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 CCDC43Q96MW1 224 aaKnown RBP15.74■□□□□ 0.11
TOP3B-215ENST00000470338 TRAIPQ9BWF2 469 aa15.74■□□□□ 0.11
TOP3B-215ENST00000470338 A0A0U1RQF3 1178 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 VPS37CA5D8V6 355 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-215ENST00000470338 C5orf67F2Z3F1 127 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 H3BNC9 293 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-215ENST00000470338 RB1P06400 928 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 BMPR1AP36894 532 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 ECHDC2Q86YB7 292 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-215ENST00000470338 RNF149Q8NC42 400 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 MMTAG2Q9BU76 263 aaKnown RBP15.73■□□□□ 0.11
TOP3B-215ENST00000470338 MINDY3Q9H8M7 445 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 DACT1Q9NYF0 836 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 RWDD3Q9Y3V2 267 aa15.73■□□□□ 0.11
TOP3B-215ENST00000470338 ATG2AQ2TAZ0 1938 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 PP2D1A8MPX8 630 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 USO1O60763 962 aaKnown RBP15.72■□□□□ 0.11
TOP3B-215ENST00000470338 EOMESO95936 686 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 GATMP50440 423 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 PTENP60484 403 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 TFDP1Q14186 410 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 KRT79Q5XKE5 535 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 PADI6Q6TGC4 694 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 CATSPER4Q7RTX7 472 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 ZNF598Q86UK7 904 aaKnown RBP15.72■□□□□ 0.11
TOP3B-215ENST00000470338 MCPH1Q8NEM0 835 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 ASAP3Q8TDY4 903 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 SNX29Q8TEQ0 813 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 NFKBIZQ9BYH8 718 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 KIAA1024Q9UPX6 916 aa15.72■□□□□ 0.11
TOP3B-215ENST00000470338 MRPL42Q9Y6G3 142 aaKnown RBP15.72■□□□□ 0.11
TOP3B-215ENST00000470338 MYH15Q9Y2K3 1946 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 BMP15O95972 392 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 CYP11B2P19099 503 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 GLRA2P23416 452 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 CDC25AP30304 524 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PHKA2P46019 1235 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 GPM6BQ13491 265 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 CAPSQ13938 189 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PCBP1Q15365 356 aaKnown RBP eCLIP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 CCDC85BQ15834 202 aaPredicted RBP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PLVAPQ9BX97 442 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 POLR3FQ9H1D9 316 aaPredicted RBP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 AGPAT5Q9NUQ2 364 aa15.71■□□□□ 0.11
TOP3B-215ENST00000470338 DDX19AQ9NUU7 478 aaKnown RBP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 PIN4Q9Y237 131 aaKnown RBP15.71■□□□□ 0.11
TOP3B-215ENST00000470338 MYO7AQ13402 2215 aa15.71■□□□□ 0.1
TOP3B-215ENST00000470338 MYH11P35749 1972 aa15.71■□□□□ 0.1
TOP3B-215ENST00000470338 PLXNA4Q9HCM2 1894 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 VWA3AA6NCI4 1184 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 TBKBP1A7MCY6 615 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 HOXA2O43364 376 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 ZNF623O75123 536 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 FGFR1P11362 822 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 ATF7P17544 494 aaPredicted RBP15.7■□□□□ 0.1
TOP3B-215ENST00000470338 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
TOP3B-215ENST00000470338 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
TOP3B-215ENST00000470338 CTNNB1P35222 781 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 RESTQ13127 1097 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 HYIQ5T013 277 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 P2RX5Q93086 422 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 CASD1Q96PB1 797 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 TMEM117Q9H0C3 514 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 BHMT2Q9H2M3 363 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 GPRC5CQ9NQ84 441 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
TOP3B-215ENST00000470338 MTMR6Q9Y217 621 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms