RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 IRF2BP2Q7Z5L9 587 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 KLHL23Q8NBE8 558 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 DTX3LQ8TDB6 740 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 DDX50Q9BQ39 737 aaKnown RBP10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 NMRK1Q9NWW6 199 aa10.27□□□□□ -0.77
NHLRC3-203ENST00000470258 COL18A1P39060 1754 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 hCG_2014768A0A024R1R8 64 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 GPR75-ASB3A0A0A6YYF3 556 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 PVALEFA0A1B0GWK0 134 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 AFPP02771 609 aaKnown RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 KCNJ1P48048 391 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 COASYQ13057 564 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 LBRQ14739 615 aaKnown RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 HERC4Q5GLZ8 1057 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 C10orf76Q5T2E6 689 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 DCAF12L1Q5VU92 463 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 NEK8Q86SG6 692 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 GLYCTKQ8IVS8 523 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ZNF513Q8N8E2 541 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 SLC35G2Q8TBE7 412 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 TBCKQ8TEA7 893 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 GJA10Q969M2 543 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 LRRC37BQ96QE4 947 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 TBC1D10AQ9BXI6 508 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 UBA5Q9GZZ9 404 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 NT5C3AQ9H0P0 336 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 GANQ9H2C0 597 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ASB3Q9Y575 518 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 TJP1Q07157 1748 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 PFASO15067 1338 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ATP9AO75110 1047 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 CALCRLQ16602 461 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 EXOC3L4Q17RC7 722 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 DNAJC10Q8IXB1 793 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ASAP3Q8TDY4 903 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 CTNNBL1Q8WYA6 563 aaPredicted RBP10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ANKRD27Q96NW4 1050 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 PLA2G12BQ9BX93 195 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 ANAPC4Q9UJX5 808 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 HDAC9Q9UKV0 1011 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 USH1CQ9Y6N9 552 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 RPS6KL1Q9Y6S9 549 aa10.26□□□□□ -0.77
NHLRC3-203ENST00000470258 NPHP3-ACAD11A0A0J9YXS1 232 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 SMCO2A6NFE2 343 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 SMAPO00193 183 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CREB3O43889 395 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 WFS1O76024 890 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ZCCHC18P0CG32 403 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 FGFR2P21802 821 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 NR2F2P24468 414 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 GYG1P46976 350 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 TFAP4Q01664 338 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 DNAJC3Q13217 504 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 MPP2Q14168 576 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 TMEM266Q2M3C6 531 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 VSTM1Q6UX27 236 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CROCCP2Q86T23 111 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 TRIM59Q8IWR1 403 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 RBM46Q8TBY0 533 aaKnown RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 HES6Q96HZ4 224 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 DENND2DQ9H6A0 471 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 GRHL1Q9NZI5 618 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CHORDC1Q9UHD1 332 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 MROH5Q6ZUA9 1318 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 FAM187AA6NFU0 413 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ANKRD63C9JTQ0 380 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CCNB1P14635 433 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ACADSP16219 412 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CALCOCO2Q13137 446 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 RCN1Q15293 331 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CGB2Q6NT52 195 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 MIGA2Q7L4E1 593 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.772e-6■■■■■ 163.7
NHLRC3-203ENST00000470258 PROM2Q8N271 834 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 RBBP8NLQ8NC74 664 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ZFAND2BQ8WV99 257 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CKAP2Q8WWK9 683 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 SPOCK2Q92563 424 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 TMEM260Q9NX78 707 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 DDX3XO00571 662 aaKnown RBP eCLIP10.25□□□□□ -0.774e-7■■□□□ 14.2
NHLRC3-203ENST00000470258 SKIP12755 728 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 VPS41P49754 854 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 CCDC137Q6PK04 289 aaKnown RBP10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 RFX8Q6ZV50 586 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 ALG3Q92685 438 aa10.25□□□□□ -0.77
NHLRC3-203ENST00000470258 RAD54LQ92698 747 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms