RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SOCS7O14512 581 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 MSH4O15457 936 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 EDIL3O43854 480 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 N4BP1O75113 896 aaKnown RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 ABL1P00519 1130 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 PLEKP08567 350 aaPredicted RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 KRT13P13646 458 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 FERP16591 822 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 RFX1P22670 979 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 HOXA13P31271 388 aaPredicted RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 PSMC2P35998 433 aaKnown RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 RAB15P59190 212 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 TNNC1P63316 161 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 RASSF7Q02833 373 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 CYP4A11Q02928 519 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 GFPT1Q06210 699 aaPredicted RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 DHX9Q08211 1270 aaKnown RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 SPIRE1Q08AE8 756 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 PPP2R5CQ13362 524 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 CLUL1Q15846 466 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 TPH2Q8IWU9 490 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 SYCE1Q8N0S2 351 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 MYCT1Q8N699 235 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 SAMD3Q8N6K7 520 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 NOA1Q8NC60 698 aaKnown RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 SLC17A8Q8NDX2 589 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 GJA10Q969M2 543 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 VCPKMTQ9H867 229 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 MLXIPQ9HAP2 919 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 PDE11AQ9HCR9 933 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 GINM1Q9NU53 330 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 ZNF70Q9UC06 446 aaPredicted RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 FBXL5Q9UKA1 691 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 INTUQ9ULD6 942 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 ZBTB21Q9ULJ3 1066 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 SCN9AQ15858 1988 aa8.73□□□□□ -1.01
SMC4-212ENST00000470240 ZNF646O15015 1829 aaPredicted RBP8.73□□□□□ -1.01
SMC4-212ENST00000470240 ARHGEF35A5YM69 484 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ERICH4A6NGS2 130 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM86B1E9PN63 330 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 MEIS1O00470 390 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 CES2O00748 559 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 EPHB6O15197 1021 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 OPA1O60313 960 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 CLSTN1O94985 981 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 IVLP07476 585 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ASNSP08243 561 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM86B2P0C5J1 330 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SPATA31C1P0DKV0 1188 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 LMNB1P20700 586 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 STAT1P42224 750 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 EPHB4P54760 987 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SNAP25P60880 206 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 APBA1Q02410 837 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ARID5AQ03989 594 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 C2orf54Q08AI8 447 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 TNFAIP1Q13829 316 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 PPP2R5AQ15172 486 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 EPHA7Q15375 998 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 NAB2Q15742 525 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SLC15A2Q16348 729 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 KIAA0753Q2KHM9 967 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ASTE1Q2TB18 679 aaPredicted RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 CEP55Q53EZ4 464 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ARSHQ5FYA8 562 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 PPP1R26Q5T8A7 1209 aaPredicted RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 EMBQ6PCB8 327 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 CCDC174Q6PII3 467 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 EPM2AIP1Q7L775 607 aaPredicted RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM83AQ86UY5 434 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 IFT20Q8IY31 132 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 NIM1KQ8IY84 436 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM186BQ8IYM0 893 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SYCP3Q8IZU3 236 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 FAM133AQ8N9E0 248 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 SLC5A5Q92911 643 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 PBKQ96KB5 322 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 ZFP42Q96MM3 310 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 RIT2Q99578 217 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ZNF577Q9BSK1 485 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 TIPINQ9BVW5 301 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 GANQ9H2C0 597 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
SMC4-212ENST00000470240 VEZTQ9HBM0 779 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 ST7Q9NRC1 585 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 GCNT4Q9P109 453 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 PRDM4Q9UKN5 801 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
SMC4-212ENST00000470240 CAPN6Q9Y6Q1 641 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms