RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 NHEJ1Q9H9Q4 299 aaPredicted RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TRPC7Q9HCX4 862 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 MRFAP1Q9Y605 127 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 COL15A1P39059 1388 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 AGTP01019 485 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 MT-ND3P03897 115 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SERPINB6P35237 376 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 IRX1P78414 480 aaPredicted RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 PHEXP78562 749 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 DMTNQ08495 405 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ABCB5Q2M3G0 1257 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 KBTBD12Q3ZCT8 623 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ACAD11Q709F0 780 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 RNF180Q86T96 592 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 MB21D1Q8N884 522 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 OSCP1Q8WVF1 389 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF560Q96MR9 790 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GLT1D1Q96MS3 346 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TMCO1Q9UM00 188 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TECPR2O15040 1411 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 YBX3P16989 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CNTFP26441 200 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 GTF2H1P32780 548 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ANXA11P50995 505 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CCR3P51677 355 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 FIGNQ5HY92 759 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 RSRC2Q7L4I2 434 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TRMT1LQ7Z2T5 733 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 AGGF1Q8N302 714 aaeCLIP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 NSUN7Q8NE18 718 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 OTUB1Q96FW1 271 aaPredicted RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 RILPQ96NA2 401 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MLXIPQ9HAP2 919 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 HOXC10Q9NYD6 342 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TAB2Q9NYJ8 693 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TUBGCP4Q9UGJ1 667 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TEKT2Q9UIF3 430 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 PDXKO00764 312 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CPP00450 1065 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 GJB1P08034 283 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SNX1Q13596 522 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 NFIXQ14938 502 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TRIM69Q86WT6 500 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CRLF3Q8IUI8 442 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 THEM5Q8N1Q8 247 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 STX19Q8N4C7 294 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MRPL48Q96GC5 212 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CCDC138Q96M89 665 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 GCNAQ96QF7 691 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 EPAS1Q99814 870 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 NARFQ9UHQ1 456 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ENOPH1Q9UHY7 261 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 USP18Q9UMW8 372 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SATB2Q9UPW6 733 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MYPNQ86TC9 1320 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 K7ENM7 598 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 KCNK3O14649 394 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CAPN9O14815 690 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 EIF3HO15372 352 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MAPK4P31152 587 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ACADSBP45954 432 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 NLRP11P59045 1033 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CENPCQ03188 943 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 BYSLQ13895 437 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SCARF1Q14162 830 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 DNAJC24Q6P3W2 148 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MMS22LQ6ZRQ5 1243 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ANO5Q75V66 913 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 PDCD7Q8N8D1 485 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 EPSTI1Q96J88 318 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ARMT1Q9H993 441 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 STX18Q9P2W9 335 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SEPT3Q9UH03 358 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SUN2Q9UH99 717 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CPA4Q9UI42 421 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 RPL26L1Q9UNX3 145 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 POTEFA5A3E0 1075 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MMEP08473 750 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 POTEIP0CG38 1075 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 MAPTP10636 758 aaKnown RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 BMP3P12645 472 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CD19P15391 556 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 TSHRP16473 764 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ARL1P40616 181 aaPredicted RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 OCA2Q04671 838 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 NAB1Q13506 487 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ME3Q16798 604 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 IL31Q6EBC2 164 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 POTEEQ6S8J3 1075 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 ENAHQ8N8S7 591 aaPredicted RBP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 VPS37AQ8NEZ2 397 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CXorf38Q8TB03 319 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 CALML6Q8TD86 181 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
CCDC144A-212ENST00000470068 LPAR1Q92633 364 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms