RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 GRM6O15303 877 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 CD2BP2O95400 341 aaKnown RBP20.4■□□□□ 0.86
PHGDH-204ENST00000469443 OR52Z1P0C646 297 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 TRAPPC10P48553 1259 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 MCM2P49736 904 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 TTC38Q5R3I4 469 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 ECHDC2Q86YB7 292 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 TCP11Q8WWU5 503 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 TMEM143Q96AN5 459 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 CHST12Q9NRB3 414 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 BMP2KQ9NSY1 1161 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-204ENST00000469443 ANKEF1Q9NU02 776 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 DACT1Q9NYF0 836 aa20.4■□□□□ 0.86
PHGDH-204ENST00000469443 A0A0U1RQF3 1178 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 HOXA2O43364 376 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 FGFR1P11362 822 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.85
PHGDH-204ENST00000469443 PRPF31Q8WWY3 499 aaKnown RBP20.39■□□□□ 0.85
PHGDH-204ENST00000469443 MTRQ99707 1265 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 NSUN3Q9H649 340 aaKnown RBP20.39■□□□□ 0.85
PHGDH-204ENST00000469443 IFT122Q9HBG6 1241 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 PLAGL2Q9UPG8 496 aa20.39■□□□□ 0.85
PHGDH-204ENST00000469443 ASAP2O43150 1006 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 TECP42680 631 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 KCNQ1P51787 676 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 TCEAL5Q5H9L2 206 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 SPOUT1Q5T280 376 aaKnown RBP20.38■□□□□ 0.85
PHGDH-204ENST00000469443 CATSPER4Q7RTX7 472 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 FERMT3Q86UX7 667 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 CCDC43Q96MW1 224 aaKnown RBP20.38■□□□□ 0.85
PHGDH-204ENST00000469443 TMEM117Q9H0C3 514 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 UBE2ZQ9H832 354 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-204ENST00000469443 TUFT1Q9NNX1 390 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 ALG13Q9NP73 1137 aaKnown RBP20.38■□□□□ 0.85
PHGDH-204ENST00000469443 RNF19AQ9NV58 838 aa20.38■□□□□ 0.85
PHGDH-204ENST00000469443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-204ENST00000469443 EOMESO95936 686 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 ITGB1P05556 798 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 SPATA31C1P0DKV0 1188 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 XRCC6P12956 609 aaKnown RBP eCLIP20.37■□□□□ 0.85
PHGDH-204ENST00000469443 BMP1P13497 986 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 RARRES1P49788 294 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 SRGAP1Q7Z6B7 1085 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 ZNF598Q86UK7 904 aaKnown RBP20.37■□□□□ 0.85
PHGDH-204ENST00000469443 KLHL23Q8NBE8 558 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 SPPL3Q8TCT6 385 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 ADAMTS19Q8TE59 1207 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 TRAIPQ9BWF2 469 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 XPNPEP1Q9NQW7 623 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 AAASQ9NRG9 546 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 TYW1Q9NV66 732 aaKnown RBP20.37■□□□□ 0.85
PHGDH-204ENST00000469443 PIN4Q9Y237 131 aaKnown RBP20.37■□□□□ 0.85
PHGDH-204ENST00000469443 PCDHB12Q9Y5F1 795 aa20.37■□□□□ 0.85
PHGDH-204ENST00000469443 DGAT1O75907 488 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 SRGAP2CP0DJJ0 459 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 ATF7P17544 494 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-204ENST00000469443 TWF2Q6IBS0 349 aaKnown RBP20.36■□□□□ 0.85
PHGDH-204ENST00000469443 CATSPER3Q86XQ3 398 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 ABI1Q8IZP0 508 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 RNF169Q8NCN4 708 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 ERMNQ8TAM6 284 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 PIGOQ8TEQ8 1089 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 CASD1Q96PB1 797 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 POLR3CQ9BUI4 534 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-204ENST00000469443 CWH43Q9H720 699 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 HCSTQ9UBK5 93 aa20.36■□□□□ 0.85
PHGDH-204ENST00000469443 MED24O75448 989 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 SKIP12755 728 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 GJB2P29033 226 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 PHKA2P46019 1235 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 CAMK1Q14012 370 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 MXD4Q14582 209 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-204ENST00000469443 NBR1Q14596 966 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 CLLU1OSQ5K130 101 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 C4orf32Q8N8J7 132 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 COLGALT1Q8NBJ5 622 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 RNF149Q8NC42 400 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
PHGDH-204ENST00000469443 A0A087WWV3 80 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 LAG3P18627 525 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 DNAJB1P25685 340 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 RPA1P27694 616 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 TOB1P50616 345 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-204ENST00000469443 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.853e-6■■■■□ 23.4
PHGDH-204ENST00000469443 CSPP1Q1MSJ5 1256 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 LRRC43Q8N309 656 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 POF1BQ8WVV4 589 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 NACC1Q96RE7 527 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 MINDY3Q9H8M7 445 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 FAM105AQ9NUU6 356 aa20.34■□□□□ 0.85
PHGDH-204ENST00000469443 ARL2P36404 184 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 RAB27AP51159 221 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 UBE3AQ05086 875 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 PTGDRQ13258 359 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 TFDP1Q14186 410 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 COL19A1Q14993 1142 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 HAUS3Q68CZ6 603 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 MCTP1Q6DN14 999 aa20.33■□□□□ 0.85
PHGDH-204ENST00000469443 LRRC55Q6ZSA7 311 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms