RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 A0A0D9SFI3 127 aa14.45□□□□□ -0.1
HDAC6-217ENST00000469223 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 KLRC2P26717 231 aa14.45□□□□□ -0.1
HDAC6-217ENST00000469223 MLF2Q15773 248 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 UNQ6494/PRO21346Q6UXR6 183 aa14.45□□□□□ -0.1
HDAC6-217ENST00000469223 DDX53Q86TM3 631 aaKnown RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 CMASQ8NFW8 434 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 OTUD7AQ8TE49 926 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 IGSF21Q96ID5 467 aa14.45□□□□□ -0.1
HDAC6-217ENST00000469223 ZSCAN10Q96SZ4 725 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 PRMT8Q9NR22 394 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-217ENST00000469223 SEMA4GQ9NTN9 838 aa14.45□□□□□ -0.1
HDAC6-217ENST00000469223 LRP3O75074 770 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 CNPP09543 421 aaKnown RBP14.44□□□□□ -0.1
HDAC6-217ENST00000469223 MYBP10242 640 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 KLRC1P26715 233 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 CCDC178Q5BJE1 867 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 ZNF589Q86UQ0 364 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-217ENST00000469223 KIAA0319LQ8IZA0 1049 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 DDX1Q92499 740 aaKnown RBP14.44□□□□□ -0.1
HDAC6-217ENST00000469223 CDHR1Q96JP9 859 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 KLHL5Q96PQ7 755 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 DDX23Q9BUQ8 820 aaKnown RBP14.44□□□□□ -0.1
HDAC6-217ENST00000469223 EMILIN2Q9BXX0 1053 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 JPH1Q9HDC5 661 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-217ENST00000469223 MAD2L2Q9UI95 211 aa14.44□□□□□ -0.1
HDAC6-217ENST00000469223 FREM2Q5SZK8 3169 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 CCDC195A0A1B0GUA6 201 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 FAM170BA6NMN3 283 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 B4E1Z4 1266 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 ANHXE9PGG2 379 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 INPPL1O15357 1258 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 ITGB5P18084 799 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 CD72P21854 359 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 MAGEA9P43362 315 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 CRYBB1P53674 252 aaPredicted RBP14.43□□□□□ -0.1
HDAC6-217ENST00000469223 GPC5P78333 572 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 TRAF1Q13077 416 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 IL31Q6EBC2 164 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 PRR23BQ6ZRT6 265 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 SMG7Q92540 1137 aaKnown RBP14.43□□□□□ -0.1
HDAC6-217ENST00000469223 TNPO1Q92973 898 aaKnown RBP14.43□□□□□ -0.1
HDAC6-217ENST00000469223 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 FAM227BQ96M60 508 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 LTB4R2Q9NPC1 389 aa14.43□□□□□ -0.1
HDAC6-217ENST00000469223 RFPL2O75678 378 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 ZIC2O95409 532 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-217ENST00000469223 VTNP04004 478 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 RETP07949 1114 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 LAMP2P13473 410 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 MTMR1Q13613 665 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 HELLSQ9NRZ9 838 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
HDAC6-217ENST00000469223 ZSCAN20P17040 1043 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 NCLP19338 710 aaKnown RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 TARSP26639 723 aaKnown RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 CSRP2Q16527 193 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 ZNF598Q86UK7 904 aaKnown RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 PIBF1Q8WXW3 757 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 FGF14Q92915 247 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 MYL10Q9BUA6 226 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 RPP25Q9BUL9 199 aaKnown RBP14.41□□□□□ -0.1
HDAC6-217ENST00000469223 OSBPL6Q9BZF3 934 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 LHX6Q9UPM6 363 aa14.41□□□□□ -0.1
HDAC6-217ENST00000469223 TENM4Q6N022 2769 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 PALM3A6NDB9 673 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-217ENST00000469223 GPR32O75388 356 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 TDGF1P13385 188 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 STAT5BP51692 787 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 ACTR2P61160 394 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 PRKCQQ04759 706 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 IFIT1BQ5T764 474 aaKnown RBP14.4□□□□□ -0.1
HDAC6-217ENST00000469223 PLPPR4Q7Z2D5 763 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 CUL5Q93034 780 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 FAM126AQ9BYI3 521 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-217ENST00000469223 RHOBTB2Q9BYZ6 727 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 GBP3Q9H0R5 595 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 DNAJB4Q9UDY4 337 aa14.4□□□□□ -0.1
HDAC6-217ENST00000469223 COL1A2P08123 1366 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 PNMA6FA0A0J9YX94 578 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 C2CD2LO14523 706 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 CYTH3O43739 400 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 B4GALT3O60512 393 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 GALTP07902 379 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 SLC11A1P49279 550 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 RING1Q06587 406 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 MTAPQ13126 283 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 MCMDC2Q4G0Z9 681 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 ZBTB41Q5SVQ8 909 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 C20orf194Q5TEA3 1177 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 LRSAM1Q6UWE0 723 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 PARM1Q6UWI2 310 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 CYP26C1Q6V0L0 522 aa14.39□□□□□ -0.11
HDAC6-217ENST00000469223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-217ENST00000469223 KDF1Q8NAX2 398 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms