RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 FOXP2O15409 715 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 DDX53Q86TM3 631 aaKnown RBP12.19□□□□□ -0.46
TRAIP-202ENST00000469027 TMEM173Q86WV6 379 aaPredicted RBP12.19□□□□□ -0.46
TRAIP-202ENST00000469027 FAM160A2Q8N612 972 aaPredicted RBP12.19□□□□□ -0.46
TRAIP-202ENST00000469027 HELQQ8TDG4 1101 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 FGF14Q92915 247 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
TRAIP-202ENST00000469027 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
TRAIP-202ENST00000469027 ARRDC1-AS1Q9H2J1 176 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 RNF19AQ9NV58 838 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 GREB1Q4ZG55 1949 aa12.19□□□□□ -0.46
TRAIP-202ENST00000469027 HRO43593 1189 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 RFPL2O75678 378 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 ZFYP08048 801 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-202ENST00000469027 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
TRAIP-202ENST00000469027 TDGF1P13385 188 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 FAM189BP81408 668 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 SEMA3FQ13275 785 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 RNF43Q68DV7 783 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 KIAA1211LQ6NV74 962 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 PARM1Q6UWI2 310 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 CYP26C1Q6V0L0 522 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 ZNF852Q6ZMS4 543 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 FAM43BQ6ZT52 329 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-202ENST00000469027 NME8Q8N427 588 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 TMEM40Q8WWA1 233 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
TRAIP-202ENST00000469027 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 NDRG2Q9UN36 371 aaKnown RBP12.18□□□□□ -0.46
TRAIP-202ENST00000469027 WASF3Q9UPY6 502 aa12.18□□□□□ -0.46
TRAIP-202ENST00000469027 CHURC1-FNTBB4DL54 471 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 C2CD2LO14523 706 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 OPLAHO14841 1288 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 ORC4O43929 436 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 ZNF806P0C7X5 589 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 MS4A1P11836 297 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 FNTBP49356 437 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 CCR3P51677 355 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 PLCB4Q15147 1175 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
TRAIP-202ENST00000469027 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
TRAIP-202ENST00000469027 IGSF21Q96ID5 467 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 BBC3Q96PG8 261 aaPredicted RBP12.17□□□□□ -0.46
TRAIP-202ENST00000469027 MAP3K20Q9NYL2 800 aaKnown RBP12.17□□□□□ -0.46
TRAIP-202ENST00000469027 GPSM3Q9Y4H4 160 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 WDFY3Q8IZQ1 3526 aa12.17□□□□□ -0.46
TRAIP-202ENST00000469027 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 TRIM6-TRIM34B2RNG4 842 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-202ENST00000469027 STAM2O75886 525 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-202ENST00000469027 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
TRAIP-202ENST00000469027 C19orf57Q0VDD7 668 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 SH3PXD2AQ5TCZ1 1133 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 MTSS1LQ765P7 747 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 FAM228AQ86W67 206 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 ECHDC2Q86YB7 292 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
TRAIP-202ENST00000469027 GLIS3Q8NEA6 775 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 OSMRQ99650 979 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 SMOC1Q9H4F8 434 aa12.16□□□□□ -0.46
TRAIP-202ENST00000469027 MRPL17Q9NRX2 175 aaKnown RBP12.16□□□□□ -0.46
TRAIP-202ENST00000469027 GSTTP1A0A1W2PQM5 241 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 GLUD1P00367 558 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 ADH1AP07327 375 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 CNR2P34972 360 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 AK2P54819 239 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 BCL7CQ8WUZ0 217 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-202ENST00000469027 KXD1Q9BQD3 176 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 MKNK1Q9BUB5 465 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 CHRDQ9H2X0 955 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 AZI2Q9H6S1 392 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 JMJD4Q9H9V9 463 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 TCP11L1Q9NUJ3 509 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
TRAIP-202ENST00000469027 ZFP37Q9Y6Q3 630 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-202ENST00000469027 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.47
TRAIP-202ENST00000469027 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 HYAL3O43820 417 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-202ENST00000469027 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 FSHRP23945 695 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 CXCL12P48061 93 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 SATB1Q01826 763 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 GHRHRQ02643 423 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 RNASELQ05823 741 aaKnown RBP12.14□□□□□ -0.47
TRAIP-202ENST00000469027 DSC3Q14574 896 aa12.14□□□□□ -0.47
TRAIP-202ENST00000469027 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms