RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HOOK3Q86VS8 718 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PASD1Q8IV76 773 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NME8Q8N427 588 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ATP11CQ8NB49 1132 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NOA1Q8NC60 698 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 OR13H1Q8NG92 308 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PPP1R14CQ8TAE6 165 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 KLHDC4Q8TBB5 520 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PI4K2BQ8TCG2 481 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PTPRN2Q92932 1015 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 GRAMD1AQ96CP6 724 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 FAM81BQ96LP2 452 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 RNPC3Q96LT9 517 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 GBP5Q96PP8 586 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NEK1Q96PY6 1258 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 USP28Q96RU2 1077 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 MEIS3Q99687 375 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CENPKQ9BS16 269 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TUBB6Q9BUF5 446 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TIPINQ9BVW5 301 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 BRD8Q9H0E9 1235 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 HSD3B7Q9H2F3 369 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SLC12A5Q9H2X9 1139 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SUGCTQ9HAC7 445 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TMBIM4Q9HC24 238 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 C11orf16Q9NQ32 467 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ECHDC1Q9NTX5 307 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 FANCLQ9NW38 375 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 STOML1Q9UBI4 398 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 G3BP2Q9UN86 482 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 HPSEQ9Y251 543 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 LRCH1Q9Y2L9 728 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SH3GLB1Q9Y371 365 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 C2CD2Q9Y426 696 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 RBM8AQ9Y5S9 174 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NR2E3Q9Y5X4 410 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ABCA8O94911 1581 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SRCAPQ6ZRS2 3230 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 DEPDC5O75140 1603 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 A0A1W2PQC6 194 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM110-MUSTN1A8MSY1 372 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 IPO5O00410 1097 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ENPP3O14638 875 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CYTH3O43739 400 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ZBED4O75132 1171 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TRPA1O75762 1119 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 KIF4AO95239 1232 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CHGBP05060 677 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CLTAP09496 248 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 FAM200BP0CF97 657 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TRIM21P19474 475 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 HSPA9P38646 679 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PBX1P40424 430 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PDE6CP51160 858 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PLCD1P51178 756 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ADKP55263 362 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 RPL26P61254 145 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TUBA4AP68366 448 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 JAG1P78504 1218 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PDE1BQ01064 536 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 SKIDA1Q1XH10 827 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CFAP221Q4G0U5 840 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 HSP90AA5PQ58FG0 334 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 WASHC2DQ5SRD0 308 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 SFMBT2Q5VUG0 894 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 C8orf74Q6P047 294 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TRPM8Q7Z2W7 1104 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 POGZQ7Z3K3 1410 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TMC7Q7Z402 723 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM110Q86TL2 294 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 RAB11FIP4Q86YS3 637 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CROCCP3Q8IVE0 287 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 FAM186BQ8IYM0 893 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ENDOVQ8N8Q3 282 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 RBBP8NLQ8NC74 664 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ATP8B4Q8TF62 1192 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 GTF3C2Q8WUA4 911 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 SYTL4Q96C24 671 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 NUDT16Q96DE0 195 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ZMAT2Q96NC0 199 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ZNF570Q96NI8 536 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ZIM3Q96PE6 472 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TMEM237Q96Q45 408 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 HAPLN3Q96S86 360 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 SEC62Q99442 399 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 NDNQ99608 321 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 CGREF1Q99674 301 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 C14orf93Q9H972 538 aaKnown RBP5.27□□□□□ -1.57
SF3B1-207ENST00000468925 KCNMB3Q9NPA1 279 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 GDF3Q9NR23 364 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 ARHGEF3Q9NR81 526 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 FAM114A2Q9NRY5 505 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 HELLSQ9NRZ9 838 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 TXLNGQ9NUQ3 528 aa5.27□□□□□ -1.57
SF3B1-207ENST00000468925 PCMTD2Q9NV79 361 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms