RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 LRRC55Q6ZSA7 311 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 RTN4RL1Q86UN2 441 aaPredicted RBP5.24□□□□□ -1.57
SSB-208ENST00000468600 VRK3Q8IV63 474 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 ANKRD53Q8N9V6 530 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 FOXRED1Q96CU9 486 aaPredicted RBP5.24□□□□□ -1.57
SSB-208ENST00000468600 RPL10LQ96L21 214 aaKnown RBP5.24□□□□□ -1.57
SSB-208ENST00000468600 TCF25Q9BQ70 676 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 SNTG2Q9NY99 539 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 SFMBT1Q9UHJ3 866 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 FZD1Q9UP38 647 aa5.24□□□□□ -1.57
SSB-208ENST00000468600 RBM8AQ9Y5S9 174 aaKnown RBP5.24□□□□□ -1.57
SSB-208ENST00000468600 XDHP47989 1333 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 A0A0A6YYK5 440 aaPredicted RBP5.23□□□□□ -1.57
SSB-208ENST00000468600 MFAP3LO75121 409 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 HIP1RO75146 1068 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 IPO13O94829 963 aaKnown RBP5.23□□□□□ -1.57
SSB-208ENST00000468600 FNTBP49356 437 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 ARHGAP44Q17R89 818 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 TMEM177Q53S58 311 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 FKBP15Q5T1M5 1219 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 ABHD17CQ6PCB6 329 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 RHOUQ7L0Q8 258 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 ADGRG3Q86Y34 549 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 MB21D1Q8N884 522 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 ZSWIM2Q8NEG5 633 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 THAP3Q8WTV1 239 aaPredicted RBP5.23□□□□□ -1.57
SSB-208ENST00000468600 ATXN2LQ8WWM7 1075 aaKnown RBP5.23□□□□□ -1.57
SSB-208ENST00000468600 E2F7Q96AV8 911 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 PGBD4Q96DM1 585 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 MLST8Q9BVC4 326 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 SAE1Q9UBE0 346 aaPredicted RBP5.23□□□□□ -1.57
SSB-208ENST00000468600 RCAN3Q9UKA8 241 aa5.23□□□□□ -1.57
SSB-208ENST00000468600 POLR2AP24928 1970 aaKnown RBP5.22□□□□□ -1.57
SSB-208ENST00000468600 KLRG2A4D1S0 409 aaPredicted RBP5.22□□□□□ -1.57
SSB-208ENST00000468600 ERBB2P04626 1255 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 MECP2P51608 486 aaKnown RBP5.22□□□□□ -1.57
SSB-208ENST00000468600 RABGGTBP53611 331 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 IRF9Q00978 393 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 TCIRG1Q13488 830 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 TMEM132BQ14DG7 1078 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 ACAP1Q15027 740 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 SOGA3Q5TF21 947 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 C2orf69Q8N8R5 385 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 BBC3Q96PG8 261 aaPredicted RBP5.22□□□□□ -1.57
SSB-208ENST00000468600 GPHA2Q96T91 129 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 MNTQ99583 582 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 DNAJC7Q99615 494 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 BOCQ9BWV1 1114 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 TRIM39Q9HCM9 518 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 IL23AQ9NPF7 189 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 TRPS1Q9UHF7 1281 aa5.22□□□□□ -1.57
SSB-208ENST00000468600 UBE2QL1A1L167 161 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 B3GALT2O43825 422 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 CDK4P11802 303 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 GTF2F1P35269 517 aaKnown RBP eCLIP5.21□□□□□ -1.58
SSB-208ENST00000468600 GAGE13Q4V321 117 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 HECTD2Q5U5R9 776 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 KRT40Q6A162 431 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 BRAPQ7Z569 592 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 IGSF22Q8N9C0 903 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 TOR3AQ9H497 397 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 DENND2AQ9ULE3 1009 aa5.21□□□□□ -1.58
SSB-208ENST00000468600 GRID2IPA4D2P6 1211 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 ADAM8P78325 824 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 TIGD2Q4W5G0 525 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 HTR3DQ70Z44 454 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 FGD2Q7Z6J4 655 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 ELOA2Q8IYF1 753 aaPredicted RBP5.2□□□□□ -1.58
SSB-208ENST00000468600 ARL8AQ96BM9 186 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 CYP4F11Q9HBI6 524 aa5.2□□□□□ -1.58
SSB-208ENST00000468600 NCOA5Q9HCD5 579 aaKnown RBP5.2□□□□□ -1.58
SSB-208ENST00000468600 B4E1Z4 1266 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 INO80B-WBP1J3KQ70 363 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 PRLP01236 227 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 ZNF37AP17032 561 aaPredicted RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 ROM1Q03395 351 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 C2orf27AQ580R0 203 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 COLEC12Q5KU26 742 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 ERCC4Q92889 916 aaPredicted RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 NKD2Q969F2 451 aaPredicted RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 FAM193BQ96PV7 902 aaPredicted RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 SRPK1Q96SB4 655 aaKnown RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 INO80BQ9C086 356 aaPredicted RBP5.19□□□□□ -1.58
SSB-208ENST00000468600 ACSS2Q9NR19 701 aa5.19□□□□□ -1.58
SSB-208ENST00000468600 C2orf78A6NCI8 922 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 PLD2O14939 933 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 RECQL4O94761 1208 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 DGKDQ16760 1214 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 PLEKHG4Q58EX7 1191 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 ZCCHC8Q6NZY4 707 aaKnown RBP5.18□□□□□ -1.58
SSB-208ENST00000468600 DDX53Q86TM3 631 aaKnown RBP5.18□□□□□ -1.58
SSB-208ENST00000468600 MDGA1Q8NFP4 955 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 OR5AN1Q8NGI8 311 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 MAML3Q96JK9 1138 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 HAPLN2Q9GZV7 340 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 KCMF1Q9P0J7 381 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 SORCS3Q9UPU3 1222 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 HS3ST4Q9Y661 456 aa5.18□□□□□ -1.58
SSB-208ENST00000468600 DVL2O14641 736 aa5.17□□□□□ -1.58
SSB-208ENST00000468600 CYP17A1P05093 508 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms