RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 BSNDQ8WZ55 320 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 CALML4Q96GE6 196 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 CDK5RAP3Q96JB5 506 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 ZNF668Q96K58 619 aaPredicted RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 FDXACB1Q9BRP7 624 aaPredicted RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 FTHL17Q9BXU8 183 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 STK17AQ9UEE5 414 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
MSH5-212ENST00000467319 ST3GAL5Q9UNP4 418 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 ATP6V1DQ9Y5K8 247 aa12.27□□□□□ -0.45
MSH5-212ENST00000467319 TRANK1O15050 2925 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 GPR182O15218 404 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 MGEA5O60502 916 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 PLA2G4BP0C869 781 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 KCNJ6P48051 423 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 ZRSR1Q15695 479 aaKnown RBP12.26□□□□□ -0.45
MSH5-212ENST00000467319 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
MSH5-212ENST00000467319 HERC6Q8IVU3 1022 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 RAD54LQ92698 747 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 KIFAP3Q92845 792 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 PLIN2Q99541 437 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 TIPINQ9BVW5 301 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 GCOM2Q9BZD3 368 aaPredicted RBP12.26□□□□□ -0.45
MSH5-212ENST00000467319 MINDY3Q9H8M7 445 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 KCND2Q9NZV8 630 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 ADGRA3Q8IWK6 1321 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 TTC3P53804 2025 aa12.26□□□□□ -0.45
MSH5-212ENST00000467319 GRXCR1A8MXD5 290 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 SFPQP23246 707 aaKnown RBP eCLIP12.25□□□□□ -0.45
MSH5-212ENST00000467319 TXLNAP40222 546 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 NAMPTP43490 491 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 PHKA2P46019 1235 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 ME1P48163 572 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 PTENP60484 403 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 MBTD1Q05BQ5 628 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 TFDP1Q14186 410 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 E2F4Q16254 413 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 AMHR2Q16671 573 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 ODR4Q5SWX8 454 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 FAM102BQ5T8I3 360 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 RESP18Q5W5W9 173 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 SRGAP1Q7Z6B7 1085 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 RTN4RL1Q86UN2 441 aaPredicted RBP12.25□□□□□ -0.45
MSH5-212ENST00000467319 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
MSH5-212ENST00000467319 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 PBX4Q9BYU1 374 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 RC3H2Q9HBD1 1191 aaKnown RBP12.25□□□□□ -0.45
MSH5-212ENST00000467319 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 AGPAT5Q9NUQ2 364 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 TCHHQ07283 1943 aa12.25□□□□□ -0.45
MSH5-212ENST00000467319 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 C9IYK1 514 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 HIP1RO75146 1068 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 CSDE1O75534 798 aaKnown RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 GJB5O95377 273 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 AMHP03971 560 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 SRGAP2CP0DJJ0 459 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 FGFR4P22455 802 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 DNAJB2P25686 324 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 HTRA4P83105 476 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 PCBP1Q15365 356 aaKnown RBP eCLIP12.24□□□□□ -0.45
MSH5-212ENST00000467319 CCDC73Q6ZRK6 1079 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 MAEAQ7L5Y9 396 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 KCNN1Q92952 543 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 SPATA32Q96LK8 384 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 INO80BQ9C086 356 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 SCAND2PQ9GZW5 306 aaPredicted RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 CCDC113Q9H0I3 377 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 RGS18Q9NS28 235 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 ODF2LQ9ULJ1 636 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 YBX2Q9Y2T7 364 aaKnown RBP12.24□□□□□ -0.45
MSH5-212ENST00000467319 PCDHA11Q9Y5I1 949 aa12.24□□□□□ -0.45
MSH5-212ENST00000467319 CNTNAP2Q9UHC6 1331 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 TMEM265A0A087WTH1 108 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 FAM237AA0A1B0GTK4 181 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 ENPP3O14638 875 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 TSPAN1O60635 241 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSH5-212ENST00000467319 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
MSH5-212ENST00000467319 HOXA11P31270 313 aaPredicted RBP12.23□□□□□ -0.45
MSH5-212ENST00000467319 PBX2P40425 430 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 ZNF131P52739 623 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
MSH5-212ENST00000467319 MCM6Q14566 821 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 PPP2R5AQ15172 486 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 RAB30Q15771 203 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 MYOCDQ8IZQ8 938 aa12.23□□□□□ -0.45
MSH5-212ENST00000467319 RASSF8Q8NHQ8 419 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms