RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
CHD1L-205ENST00000467213 PRKAG3Q9UGI9 489 aa16.82■□□□□ 0.28
CHD1L-205ENST00000467213 EVI5O60447 810 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 AKAP3O75969 853 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 NR3C1P04150 777 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 CCNB1P14635 433 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 FBXO25Q8TCJ0 367 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 PRMT1Q99873 361 aaKnown RBP16.81■□□□□ 0.28
CHD1L-205ENST00000467213 CORO1CQ9ULV4 474 aaPredicted RBP16.81■□□□□ 0.28
CHD1L-205ENST00000467213 ARL2BPQ9Y2Y0 163 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 ABLIM1O14639 778 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 RASGRF2O14827 1237 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 GAP43P17677 238 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 TNNI2P48788 182 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 KIF22Q14807 665 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 UBL4BQ8N7F7 174 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 ERMNQ8TAM6 284 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 RXFP1Q9HBX9 757 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 MTMR4Q9NYA4 1195 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 NR2E1Q9Y466 385 aa16.81■□□□□ 0.28
CHD1L-205ENST00000467213 BACH1O14867 736 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 RPA1P27694 616 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 ENOX2Q16206 610 aaKnown RBP16.8■□□□□ 0.28
CHD1L-205ENST00000467213 LRCH2Q5VUJ6 765 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 RNF43Q68DV7 783 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 BZW1Q7L1Q6 419 aaKnown RBP16.8■□□□□ 0.28
CHD1L-205ENST00000467213 TEX9Q8N6V9 391 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 AGAP11Q8TF27 550 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 COA7Q96BR5 231 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 SLC5A4Q9NY91 659 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 ASTN1O14525 1302 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 CLTAP09496 248 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 PLTPP55058 493 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 NAA25Q14CX7 972 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 GPATCH4Q5T3I0 446 aaKnown RBP16.8■□□□□ 0.28
CHD1L-205ENST00000467213 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
CHD1L-205ENST00000467213 JMJD4Q9H9V9 463 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
CHD1L-205ENST00000467213 PPP1R12BO60237 982 aaPredicted RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ATP5HO75947 161 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 UBOX5O94941 541 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 PAX7P23759 505 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 IFI35P80217 286 aaPredicted RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 MYO1EQ12965 1108 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 PPP2R5AQ15172 486 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 SPDYAQ5MJ70 313 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 VAT1LQ9HCJ6 419 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ERVK-5Q9HDB9 667 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 USP40Q9NVE5 1235 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 CTNNAL1Q9UBT7 734 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 AJAP1Q9UKB5 411 aaPredicted RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 POTEB3A0JP26 581 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 POTECB2RU33 542 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 MARCH6O60337 910 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 VIMP08670 466 aaKnown RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 PDE6BP35913 854 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 SPIRE1Q08AE8 756 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 POTEBQ6S5H4 581 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 SLF2Q8IX21 1173 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ARMC2Q8NEN0 867 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 SH3TC2Q8TF17 1288 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 CRYGNQ8WXF5 182 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ECT2Q9H8V3 914 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 OSGEPQ9NPF4 335 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ABCF3Q9NUQ8 709 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 RPL26L1Q9UNX3 145 aaKnown RBP16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ACTL7BQ9Y614 415 aa16.79■□□□□ 0.28
CHD1L-205ENST00000467213 ATP2C2O75185 946 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 ALDH5A1P51649 535 aaPredicted RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 AP3B2Q13367 1082 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 PARP6Q2NL67 630 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 PRELID2Q8N945 189 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 TMEM174Q8WUU8 243 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 WHRNQ9P202 907 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 DNM3Q9UQ16 869 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 SMNDC1O75940 238 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 PSMC2P35998 433 aaKnown RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 CASP5P51878 434 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 DIXDC1Q155Q3 683 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 Q4G0T1 1027 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 PNMA8AQ86V59 439 aaPredicted RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 GPR88Q9GZN0 384 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 SEMA4AQ9H3S1 761 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
CHD1L-205ENST00000467213 SNX24Q9Y343 169 aa16.78■□□□□ 0.28
CHD1L-205ENST00000467213 ZNF536O15090 1300 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms