RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 A0A0U1RQF3 1178 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 GAS2O43903 313 aaKnown RBP18.6■□□□□ 0.57
SDHB-203ENST00000466613 KCNA5P22460 613 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 CAMK1Q14012 370 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 COL19A1Q14993 1142 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 EMC2Q15006 297 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 RABEP1Q15276 862 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 LEXMQ3ZCV2 418 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 SPOUT1Q5T280 376 aaKnown RBP18.6■□□□□ 0.57
SDHB-203ENST00000466613 SPPL3Q8TCT6 385 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 PSPC1Q8WXF1 523 aaKnown RBP18.6■□□□□ 0.57
SDHB-203ENST00000466613 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
SDHB-203ENST00000466613 NECAB3Q96P71 396 aaPredicted RBP18.6■□□□□ 0.57
SDHB-203ENST00000466613 HSD17B14Q9BPX1 270 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 RNF19AQ9NV58 838 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 PCDHB12Q9Y5F1 795 aa18.6■□□□□ 0.57
SDHB-203ENST00000466613 ZBTB39O15060 712 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 CSPG5O95196 566 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 LYPLA2O95372 231 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 ATP2B1P20020 1258 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 MCM7P33993 719 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 ZNF598Q86UK7 904 aaKnown RBP18.59■□□□□ 0.57
SDHB-203ENST00000466613 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 TMEM143Q96AN5 459 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 CASD1Q96PB1 797 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 TMEM60Q9H2L4 133 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 CWH43Q9H720 699 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 IFT122Q9HBG6 1241 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 BMP2KQ9NSY1 1161 aaPredicted RBP18.59■□□□□ 0.57
SDHB-203ENST00000466613 TYW1Q9NV66 732 aaKnown RBP18.59■□□□□ 0.57
SDHB-203ENST00000466613 HCSTQ9UBK5 93 aa18.59■□□□□ 0.57
SDHB-203ENST00000466613 POTEMA6NI47 508 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 NCK2O43639 380 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 ST18O60284 1047 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 EOMESO95936 686 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 LAG3P18627 525 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 DNAJB1P25685 340 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 ORC2Q13416 577 aaPredicted RBP18.58■□□□□ 0.56
SDHB-203ENST00000466613 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 ABI1Q8IZP0 508 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 LRRC43Q8N309 656 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 RNF169Q8NCN4 708 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.58■□□□□ 0.56
SDHB-203ENST00000466613 POF1BQ8WVV4 589 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 PRPF31Q8WWY3 499 aaKnown RBP18.58■□□□□ 0.56
SDHB-203ENST00000466613 MTRQ99707 1265 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 TRAIPQ9BWF2 469 aa18.58■□□□□ 0.56
SDHB-203ENST00000466613 PIN4Q9Y237 131 aaKnown RBP18.58■□□□□ 0.56
SDHB-203ENST00000466613 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
SDHB-203ENST00000466613 UBE3AQ05086 875 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 LAMTOR4Q0VGL1 99 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 HYAL1Q12794 435 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 GNL2Q13823 731 aaKnown RBP18.57■□□□□ 0.56
SDHB-203ENST00000466613 CLLU1OSQ5K130 101 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 TWF2Q6IBS0 349 aaKnown RBP18.57■□□□□ 0.56
SDHB-203ENST00000466613 FERMT3Q86UX7 667 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 NOSTRINQ8IVI9 506 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 COLGALT1Q8NBJ5 622 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 PPP2R3CQ969Q6 453 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 UPF2Q9HAU5 1272 aaKnown RBP18.57■□□□□ 0.56
SDHB-203ENST00000466613 XPNPEP1Q9NQW7 623 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 ANKEF1Q9NU02 776 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 CLDND1Q9NY35 253 aa18.57■□□□□ 0.56
SDHB-203ENST00000466613 H3BQ06 376 aaPredicted RBP18.56■□□□□ 0.56
SDHB-203ENST00000466613 ASAP2O43150 1006 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 SRGAP2CP0DJJ0 459 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 IRS1P35568 1242 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 PHKA2P46019 1235 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 CTC1Q2NKJ3 1217 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 TTC38Q5R3I4 469 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 LRRC55Q6ZSA7 311 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 SRGAP1Q7Z6B7 1085 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 THNSL1Q8IYQ7 743 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 CCDC43Q96MW1 224 aaKnown RBP18.56■□□□□ 0.56
SDHB-203ENST00000466613 AGPAT5Q9NUQ2 364 aa18.56■□□□□ 0.56
SDHB-203ENST00000466613 DGAT1O75907 488 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 FGF18O76093 207 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 OR52Z1P0C646 297 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 SKIP12755 728 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 TRAPPC10P48553 1259 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 RARRES1P49788 294 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 RAB27AP51159 221 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 ZNF174Q15697 407 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 PUS10Q3MIT2 529 aaKnown RBP18.55■□□□□ 0.56
SDHB-203ENST00000466613 PTCRAQ6ISU1 281 aaPredicted RBP18.55■□□□□ 0.56
SDHB-203ENST00000466613 RNF149Q8NC42 400 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 HELQQ8TDG4 1101 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 MRPL9Q9BYD2 267 aaKnown RBP18.55■□□□□ 0.56
SDHB-203ENST00000466613 MINDY3Q9H8M7 445 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 FAM105AQ9NUU6 356 aa18.55■□□□□ 0.56
SDHB-203ENST00000466613 SPATA31C1P0DKV0 1188 aa18.54■□□□□ 0.56
SDHB-203ENST00000466613 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDHB-203ENST00000466613 IL9P15248 144 aa18.54■□□□□ 0.56
SDHB-203ENST00000466613 GTF2F1P35269 517 aaKnown RBP eCLIP18.54■□□□□ 0.56
SDHB-203ENST00000466613 LTBRP36941 435 aa18.54■□□□□ 0.56
SDHB-203ENST00000466613 TECP42680 631 aa18.54■□□□□ 0.56
SDHB-203ENST00000466613 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms