RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 MXD4Q14582 209 aaPredicted RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 ANKRD40Q6AI12 368 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 ZBTB8OSQ8IWT0 167 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 PCSK9Q8NBP7 692 aaKnown RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 GOLGA5Q8TBA6 731 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 ASAP3Q8TDY4 903 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 KAT2BQ92831 832 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 FIZ1Q96SL8 496 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 MAP7D2Q96T17 732 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 KIFC3Q9BVG8 833 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 SRRTQ9BXP5 876 aaKnown RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 ST6GALNAC4Q9H4F1 302 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 SAMSN1Q9NSI8 373 aaKnown RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 SUCLA2Q9P2R7 463 aaPredicted RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 NRCAMQ92823 1304 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 C17orf102A2RUQ5 167 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 PDXKO00764 312 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 TPM3P06753 285 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 TPM2P07951 284 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 GNAT1P11488 350 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 GLRA2P23416 452 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 NKX3-2P78367 333 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 GTF2BQ00403 316 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 STRN3Q13033 797 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 EDRF1Q3B7T1 1238 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 SARM1Q6SZW1 724 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 BICD1Q96G01 975 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 MED15Q96RN5 788 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
VPS16-206ENST00000466415 GBP3Q9H0R5 595 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 KCTD10Q9H3F6 313 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 MYH11P35749 1972 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 PHLPP2Q6ZVD8 1323 aa13.34□□□□□ -0.27
VPS16-206ENST00000466415 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 HAS3O00219 553 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CETN3O15182 167 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ASAP2O43150 1006 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 PPP1R37O75864 691 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ADCY5O95622 1261 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ZNF18P17022 549 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 NR2F2P24468 414 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 DEKP35659 375 aaKnown RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 FANCCQ00597 558 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 FKBP3Q00688 224 aaKnown RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 DRP2Q13474 957 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CAPSQ13938 189 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CCDC40Q4G0X9 1142 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 FILIP1LQ4L180 1135 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 NFRKBQ6P4R8 1299 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 TMEM161BQ8NDZ6 487 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 CNOT6LQ96LI5 555 aaKnown RBP13.33□□□□□ -0.28
VPS16-206ENST00000466415 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 SCLT1Q96NL6 688 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 CTAGE1Q96RT6 745 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
VPS16-206ENST00000466415 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ARHGAP28Q9P2N2 729 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 TBX20Q9UMR3 447 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 TRAF3IP3Q9Y228 551 aa13.33□□□□□ -0.28
VPS16-206ENST00000466415 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 CABYRO75952 493 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 ASGR1P07306 291 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 SRGAP2CP0DJJ0 459 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 HSPA8P11142 646 aaKnown RBP13.32□□□□□ -0.28
VPS16-206ENST00000466415 CYP2C9P11712 490 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 EEF1GP26641 437 aaKnown RBP13.32□□□□□ -0.28
VPS16-206ENST00000466415 MTIF2P46199 727 aaKnown RBP13.32□□□□□ -0.28
VPS16-206ENST00000466415 EFNA5P52803 228 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 KCNA1Q09470 495 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 KCNA10Q16322 511 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 MAP4K3Q8IVH8 894 aa13.32□□□□□ -0.28
VPS16-206ENST00000466415 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms