RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 ATP6V0A4Q9HBG4 840 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 C1orf112Q9NSG2 853 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 ANKEF1Q9NU02 776 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 EYSQ5T1H1 3165 aa11.34□□□□□ -0.59
CD40-204ENST00000466205 VWA3AA6NCI4 1184 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 E9PMD0 336 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 LYPLA2O95372 231 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 SFPQP23246 707 aaKnown RBP eCLIP11.33□□□□□ -0.6
CD40-204ENST00000466205 RPA1P27694 616 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.6
CD40-204ENST00000466205 GPM6BQ13491 265 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
CD40-204ENST00000466205 HAUS3Q68CZ6 603 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 TWF2Q6IBS0 349 aaKnown RBP11.33□□□□□ -0.6
CD40-204ENST00000466205 TCP11Q8WWU5 503 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 FOXD4L4Q8WXT5 416 aaPredicted RBP11.33□□□□□ -0.6
CD40-204ENST00000466205 LPPQ93052 612 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
CD40-204ENST00000466205 DDX19AQ9NUU7 478 aaKnown RBP11.33□□□□□ -0.6
CD40-204ENST00000466205 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
CD40-204ENST00000466205 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 DGAT1O75907 488 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 LINC00271P0C7V0 271 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 LIG1P18858 919 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 SYT1P21579 422 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 GLRA2P23416 452 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 ATP2C1P98194 919 aaPredicted RBP11.32□□□□□ -0.6
CD40-204ENST00000466205 CEBPZQ03701 1054 aaKnown RBP11.32□□□□□ -0.6
CD40-204ENST00000466205 CAPSQ13938 189 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 ECHDC2Q86YB7 292 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
CD40-204ENST00000466205 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 CPB2Q96IY4 423 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
CD40-204ENST00000466205 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 ALG13Q9NP73 1137 aaKnown RBP11.32□□□□□ -0.6
CD40-204ENST00000466205 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 PPME1Q9Y570 386 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
CD40-204ENST00000466205 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 MEIS3P2A8K0S8 358 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 GRM6O15303 877 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 ERLIN2O94905 339 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 ARL2P36404 184 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 BMPR1AP36894 532 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 PBX3P40426 434 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 PHKA2P46019 1235 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 CDC42EP1Q00587 391 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 GRIN1Q05586 938 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 RESTQ13127 1097 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 SF3A1Q15459 793 aaKnown RBP11.31□□□□□ -0.6
CD40-204ENST00000466205 KRT79Q5XKE5 535 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
CD40-204ENST00000466205 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 HELQQ8TDG4 1101 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 SAMD11Q96NU1 681 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 MMTAG2Q9BU76 263 aaKnown RBP11.31□□□□□ -0.6
CD40-204ENST00000466205 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 RNF19AQ9NV58 838 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
CD40-204ENST00000466205 CLIC4Q9Y696 253 aa11.31□□□□□ -0.6
CD40-204ENST00000466205 KIAA1671Q9BY89 1806 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 TTC3P53804 2025 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 H3BNC9 293 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 LAD1O00515 517 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 ASAP2O43150 1006 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 B4GALT5O43286 388 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 GAS2O43903 313 aaKnown RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
CD40-204ENST00000466205 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 PDCP20941 246 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 TFF2Q03403 129 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 TFDP1Q14186 410 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 PDIA5Q14554 519 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 MXD4Q14582 209 aaPredicted RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 CLLU1OSQ5K130 101 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 KCNK18Q7Z418 384 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 SRGAP1Q7Z6B7 1085 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 KLHL23Q8NBE8 558 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 BSNDQ8WZ55 320 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 CASD1Q96PB1 797 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 KIFC3Q9BVG8 833 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 ELAC1Q9H777 363 aaKnown RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 FAM105AQ9NUU6 356 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 TYW1Q9NV66 732 aaKnown RBP11.3□□□□□ -0.6
CD40-204ENST00000466205 DACT1Q9NYF0 836 aa11.3□□□□□ -0.6
CD40-204ENST00000466205 MTMR6Q9Y217 621 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms