RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 BRD1O95696 1058 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 IFNAR1P17181 557 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 SFNP31947 248 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 HSPA4P34932 840 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 PHKA2P46019 1235 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 USP11P51784 963 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 BCAR1P56945 870 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 EVCP57679 992 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 KRT17Q04695 432 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 NPY5RQ15761 445 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 TMC7Q7Z402 723 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 RIPOR3Q96MK2 946 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 NIFKQ9BYG3 293 aaKnown RBP12.34□□□□□ -0.43
COL11A1-207ENST00000465209 SMOC2Q9H3U7 446 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 CYP3A7-CYP3A51PA0A087WV96 503 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 CHMP2AO43633 222 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 CDC45O75419 566 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 CYP3A7P24462 503 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 JAK3P52333 1124 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 ITIH3Q06033 890 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 TBC1D8BQ0IIM8 1120 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 Q4G0T1 1027 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 LRCH2Q5VUJ6 765 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 KREMEN2Q8NCW0 462 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 RDM1Q8NG50 284 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 JAKMIP1Q96N16 626 aaKnown RBP12.33□□□□□ -0.44
COL11A1-207ENST00000465209 NECTIN4Q96NY8 510 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 MRPL9Q9BYD2 267 aaKnown RBP12.33□□□□□ -0.44
COL11A1-207ENST00000465209 CHST12Q9NRB3 414 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 NRBP2Q9NSY0 501 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 DACT1Q9NYF0 836 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 TCEAL9Q9UHQ7 104 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 SORCS3Q9UPU3 1222 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 NR2E1Q9Y466 385 aa12.33□□□□□ -0.44
COL11A1-207ENST00000465209 A0A087WZ62 844 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 ST18O60284 1047 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 GAS7O60861 476 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 TDP2O95551 362 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 WEE2P0C1S8 567 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 CTSAP10619 480 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 MTMR3Q13615 1198 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 KANK3Q6NY19 840 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 SLC22A17Q8WUG5 538 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 AUTS2Q8WXX7 1259 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 RSPH1Q8WYR4 309 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 LPPQ93052 612 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 FDXACB1Q9BRP7 624 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-207ENST00000465209 TEKT3Q9BXF9 490 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 SLC26A6Q9BXS9 759 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
COL11A1-207ENST00000465209 SH3GLB2Q9NR46 395 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
COL11A1-207ENST00000465209 DOCK8Q8NF50 2099 aa12.32□□□□□ -0.44
COL11A1-207ENST00000465209 DMXL1Q9Y485 3027 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 PROB1E7EW31 1015 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ZNF623O75123 536 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ZC3H11AO75152 810 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 GALTP07902 379 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 EPCAMP16422 314 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 PDIA3P30101 505 aaKnown RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 NUBP1P53384 320 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 MTERF2Q49AM1 385 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 XKR3Q5GH77 459 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ANO5Q75V66 913 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 DDX53Q86TM3 631 aaKnown RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ZNF410Q86VK4 478 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 UBALD2Q8IYN6 164 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 C12orf76Q8N812 135 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-207ENST00000465209 TMEM105Q8N8V8 129 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 TMEM169Q96HH4 297 aa12.31□□□□□ -0.44
COL11A1-207ENST00000465209 GCOM2Q9BZD3 368 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms