RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SUPT16HQ9Y5B9 1047 aaKnown RBP10.88□□□□□ -0.67
APP-213ENST00000464867 DENND3A2RUS2 1198 aa10.87□□□□□ -0.67
APP-213ENST00000464867 C2orf71A6NGG8 1288 aa10.87□□□□□ -0.67
APP-213ENST00000464867 M0R2C6 588 aa10.87□□□□□ -0.67
APP-213ENST00000464867 SLC30A4O14863 429 aa10.87□□□□□ -0.67
APP-213ENST00000464867 DHX16O60231 1041 aaKnown RBP10.87□□□□□ -0.67
APP-213ENST00000464867 CCND2P30279 289 aa10.87□□□□□ -0.67
APP-213ENST00000464867 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
APP-213ENST00000464867 CYFIP1Q7L576 1253 aa10.87□□□□□ -0.67
APP-213ENST00000464867 CABP7Q86V35 215 aa10.87□□□□□ -0.67
APP-213ENST00000464867 ZNF558Q96NG5 402 aa10.87□□□□□ -0.67
APP-213ENST00000464867 C1orf112Q9NSG2 853 aa10.87□□□□□ -0.67
APP-213ENST00000464867 SPATA6Q9NWH7 488 aaPredicted RBP10.87□□□□□ -0.67
APP-213ENST00000464867 MAP3K20Q9NYL2 800 aaKnown RBP10.87□□□□□ -0.67
APP-213ENST00000464867 FBXO4Q9UKT5 387 aa10.87□□□□□ -0.67
APP-213ENST00000464867 RAB23Q9ULC3 237 aa10.87□□□□□ -0.67
APP-213ENST00000464867 FLNBO75369 2602 aaKnown RBP10.87□□□□□ -0.67
APP-213ENST00000464867 MIA3Q5JRA6 1907 aa10.86□□□□□ -0.67
APP-213ENST00000464867 NARSO43776 548 aaKnown RBP10.86□□□□□ -0.67
APP-213ENST00000464867 TBC1D4O60343 1298 aa10.86□□□□□ -0.67
APP-213ENST00000464867 PROS1P07225 676 aa10.86□□□□□ -0.67
APP-213ENST00000464867 SRFP11831 508 aa10.86□□□□□ -0.67
APP-213ENST00000464867 PGM5Q15124 567 aa10.86□□□□□ -0.67
APP-213ENST00000464867 GRIK4Q16099 956 aa10.86□□□□□ -0.67
APP-213ENST00000464867 ODR4Q5SWX8 454 aa10.86□□□□□ -0.67
APP-213ENST00000464867 FAM102BQ5T8I3 360 aa10.86□□□□□ -0.67
APP-213ENST00000464867 MRPL14Q6P1L8 145 aaKnown RBP10.86□□□□□ -0.67
APP-213ENST00000464867 KCNT2Q6UVM3 1135 aa10.86□□□□□ -0.67
APP-213ENST00000464867 TMC5Q6UXY8 1006 aa10.86□□□□□ -0.67
APP-213ENST00000464867 TRIM50Q86XT4 487 aa10.86□□□□□ -0.67
APP-213ENST00000464867 GLG1Q92896 1179 aa10.86□□□□□ -0.67
APP-213ENST00000464867 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
APP-213ENST00000464867 SHDQ96IW2 340 aa10.86□□□□□ -0.67
APP-213ENST00000464867 TTC14Q96N46 770 aa10.86□□□□□ -0.67
APP-213ENST00000464867 BCO2Q9BYV7 579 aa10.86□□□□□ -0.67
APP-213ENST00000464867 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
APP-213ENST00000464867 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
APP-213ENST00000464867 ATP6V0A4Q9HBG4 840 aa10.86□□□□□ -0.67
APP-213ENST00000464867 SPG21Q9NZD8 308 aa10.86□□□□□ -0.67
APP-213ENST00000464867 DLGAP2Q9P1A6 1054 aa10.86□□□□□ -0.67
APP-213ENST00000464867 PCDHA1Q9Y5I3 950 aa10.86□□□□□ -0.67
APP-213ENST00000464867 TRPV2Q9Y5S1 764 aa10.86□□□□□ -0.67
APP-213ENST00000464867 DENND4AQ7Z401 1863 aa10.86□□□□□ -0.67
APP-213ENST00000464867 ASPMQ8IZT6 3477 aa10.85□□□□□ -0.67
APP-213ENST00000464867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.85□□□□□ -0.67
APP-213ENST00000464867 ORC4O43929 436 aa10.85□□□□□ -0.67
APP-213ENST00000464867 CXCL14O95715 111 aa10.85□□□□□ -0.67
APP-213ENST00000464867 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
APP-213ENST00000464867 CSTF1Q05048 431 aaKnown RBP10.85□□□□□ -0.67
APP-213ENST00000464867 NR5A1Q13285 461 aa10.85□□□□□ -0.67
APP-213ENST00000464867 GIT2Q14161 759 aa10.85□□□□□ -0.67
APP-213ENST00000464867 RRP12Q5JTH9 1297 aaKnown RBP10.85□□□□□ -0.67
APP-213ENST00000464867 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
APP-213ENST00000464867 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
APP-213ENST00000464867 ABI1Q8IZP0 508 aa10.85□□□□□ -0.67
APP-213ENST00000464867 TNPO1Q92973 898 aaKnown RBP10.85□□□□□ -0.67
APP-213ENST00000464867 NXPE3Q969Y0 559 aa10.85□□□□□ -0.67
APP-213ENST00000464867 EPC1Q9H2F5 836 aa10.85□□□□□ -0.67
APP-213ENST00000464867 CWH43Q9H720 699 aa10.85□□□□□ -0.67
APP-213ENST00000464867 SFXN1Q9H9B4 322 aa10.85□□□□□ -0.67
APP-213ENST00000464867 ARHGEF3Q9NR81 526 aa10.85□□□□□ -0.67
APP-213ENST00000464867 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
APP-213ENST00000464867 ZSCAN32Q9NX65 697 aa10.85□□□□□ -0.67
APP-213ENST00000464867 ERAP1Q9NZ08 941 aa10.85□□□□□ -0.67
APP-213ENST00000464867 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
APP-213ENST00000464867 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
APP-213ENST00000464867 GCN1Q92616 2671 aaKnown RBP10.84□□□□□ -0.67
APP-213ENST00000464867 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
APP-213ENST00000464867 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
APP-213ENST00000464867 GBP2P32456 591 aaPredicted RBP10.84□□□□□ -0.67
APP-213ENST00000464867 HSD17B4P51659 736 aa10.84□□□□□ -0.67
APP-213ENST00000464867 IGBP1P78318 339 aa10.84□□□□□ -0.67
APP-213ENST00000464867 SHC2P98077 582 aa10.84□□□□□ -0.67
APP-213ENST00000464867 SP4Q02446 784 aa10.84□□□□□ -0.67
APP-213ENST00000464867 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
APP-213ENST00000464867 LETM2Q2VYF4 491 aa10.84□□□□□ -0.67
APP-213ENST00000464867 KANK3Q6NY19 840 aa10.84□□□□□ -0.67
APP-213ENST00000464867 DCLRE1AQ6PJP8 1040 aa10.84□□□□□ -0.67
APP-213ENST00000464867 GPR149Q86SP6 731 aa10.84□□□□□ -0.67
APP-213ENST00000464867 PPFIBP1Q86W92 1011 aa10.84□□□□□ -0.67
APP-213ENST00000464867 SLC44A3Q8N4M1 653 aa10.84□□□□□ -0.67
APP-213ENST00000464867 SAMD3Q8N6K7 520 aa10.84□□□□□ -0.67
APP-213ENST00000464867 PJA1Q8NG27 643 aa10.84□□□□□ -0.67
APP-213ENST00000464867 STAMQ92783 540 aa10.84□□□□□ -0.67
APP-213ENST00000464867 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.67
APP-213ENST00000464867 GPATCH3Q96I76 525 aa10.84□□□□□ -0.67
APP-213ENST00000464867 ADAM2Q99965 735 aa10.84□□□□□ -0.67
APP-213ENST00000464867 CELF4Q9BZC1 486 aaKnown RBP10.84□□□□□ -0.67
APP-213ENST00000464867 ECHDC1Q9NTX5 307 aa10.84□□□□□ -0.67
APP-213ENST00000464867 RALGAPA1Q6GYQ0 2036 aa10.84□□□□□ -0.67
APP-213ENST00000464867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.83□□□□□ -0.68
APP-213ENST00000464867 MBLAC1A4D2B0 266 aaPredicted RBP10.83□□□□□ -0.68
APP-213ENST00000464867 RRN3P2A6NIE6 340 aa10.83□□□□□ -0.68
APP-213ENST00000464867 STAM2O75886 525 aa10.83□□□□□ -0.68
APP-213ENST00000464867 KRT76Q01546 638 aa10.83□□□□□ -0.68
APP-213ENST00000464867 SPEM2Q0P670 501 aa10.83□□□□□ -0.68
APP-213ENST00000464867 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
APP-213ENST00000464867 NR6A1Q15406 480 aa10.83□□□□□ -0.68
APP-213ENST00000464867 QRICH1Q2TAL8 776 aa10.83□□□□□ -0.68
APP-213ENST00000464867 IL31Q6EBC2 164 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms