RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ASCL5Q7RTU5 278 aa16.5■□□□□ 0.23
MCF2L-220ENST00000464800 VPS52Q8N1B4 723 aa16.5■□□□□ 0.23
MCF2L-220ENST00000464800 RSPH1Q8WYR4 309 aa16.5■□□□□ 0.23
MCF2L-220ENST00000464800 ZBP1Q9H171 429 aa16.5■□□□□ 0.23
MCF2L-220ENST00000464800 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-220ENST00000464800 USTQ9Y2C2 406 aa16.5■□□□□ 0.23
MCF2L-220ENST00000464800 CARNS1A5YM72 827 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 ZNF862O60290 1169 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 FOXK2Q01167 660 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 GIT2Q14161 759 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 ATAT1Q5SQI0 421 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 PLCD3Q8N3E9 789 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 C12orf76Q8N812 135 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-220ENST00000464800 DISC1Q9NRI5 854 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 LIMD1Q9UGP4 676 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 C2orf16Q68DN1 1984 aa16.49■□□□□ 0.23
MCF2L-220ENST00000464800 SPTBN4Q9H254 2564 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 CCDC196A0A1B0GTZ2 297 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 ADAMTS3O15072 1205 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 CTSAP10619 480 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 EPCAMP16422 314 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 GNA11P29992 359 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 CIITAP33076 1130 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 POLGP54098 1239 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-220ENST00000464800 UGCGQ16739 394 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 TMEM173Q86WV6 379 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-220ENST00000464800 AUTS2Q8WXX7 1259 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 LENG9Q96B70 501 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
MCF2L-220ENST00000464800 CHST12Q9NRB3 414 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 IRAK3Q9Y616 596 aa16.48■□□□□ 0.23
MCF2L-220ENST00000464800 CHMP2AO43633 222 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 GAS7O60861 476 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.23
MCF2L-220ENST00000464800 SFNP31947 248 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 PHKA2P46019 1235 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 CLCN5P51795 746 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 JAK3P52333 1124 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 FGD1P98174 961 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 TWF2Q6IBS0 349 aaKnown RBP16.47■□□□□ 0.23
MCF2L-220ENST00000464800 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 GLB1LQ6UWU2 654 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 DDX53Q86TM3 631 aaKnown RBP16.47■□□□□ 0.23
MCF2L-220ENST00000464800 CABP7Q86V35 215 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 IGSF21Q96ID5 467 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 CYP26B1Q9NR63 512 aa16.47■□□□□ 0.23
MCF2L-220ENST00000464800 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 SKIP12755 728 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 CDC42EP1Q00587 391 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 KRT32Q14532 448 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 ADCK5Q3MIX3 580 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 TMC5Q6UXY8 1006 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 FRMD5Q7Z6J6 570 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 PPFIBP1Q86W92 1011 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 SLC22A17Q8WUG5 538 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 LPPQ93052 612 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 NKD2Q969F2 451 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 ACSF2Q96CM8 615 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 RIT2Q99578 217 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 TRAIPQ9BWF2 469 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 SFXN1Q9H9B4 322 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 TBC1D13Q9NVG8 400 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 SEPT9Q9UHD8 586 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 INPP5FQ9Y2H2 1132 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 FAM186AA6NE01 2351 aa16.46■□□□□ 0.23
MCF2L-220ENST00000464800 PTPRZ1P23471 2315 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-220ENST00000464800 MSH4O15457 936 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 DNM2P50570 870 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 RNASELQ05823 741 aaKnown RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 DRP2Q13474 957 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 LONRF3Q496Y0 759 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 NOMO2Q5JPE7 1267 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 LRCH2Q5VUJ6 765 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 CCDC149Q6ZUS6 474 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 FLCNQ8NFG4 579 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 BCL7CQ8WUZ0 217 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 TEKT3Q9BXF9 490 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 UNC45AQ9H3U1 944 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 NRDE2Q9H7Z3 1164 aa16.45■□□□□ 0.22
MCF2L-220ENST00000464800 RIF1Q5UIP0 2472 aaKnown RBP16.45■□□□□ 0.22
MCF2L-220ENST00000464800 NID2Q14112 1375 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 GALTP07902 379 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 RAB27AP51159 221 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
MCF2L-220ENST00000464800 PTPN14Q15678 1187 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 MTERF2Q49AM1 385 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 OTOP3Q7RTS5 596 aa16.44■□□□□ 0.22
MCF2L-220ENST00000464800 ZNF410Q86VK4 478 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms