RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 LIG3P49916 1009 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 SH2D3CQ8N5H7 860 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.84□□□□□ -0.19
NFXL1-203ENST00000464756 C7orf31Q8N865 590 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 CBWD1Q9BRT8 395 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 TISP43B9A030 160 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 KRT76Q01546 638 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 STXBP2Q15833 593 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 ECM1Q16610 540 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 HP1BP3Q5SSJ5 553 aaPredicted RBP13.84□□□□□ -0.19
NFXL1-203ENST00000464756 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 CCDC63Q8NA47 563 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 IPO4Q8TEX9 1081 aaKnown RBP13.84□□□□□ -0.19
NFXL1-203ENST00000464756 MXRA8Q9BRK3 442 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 HSD3B7Q9H2F3 369 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 PPP1R14CQ8TAE6 165 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 CDHR1Q96JP9 859 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 PDGFDQ9GZP0 370 aaPredicted RBP13.84□□□□□ -0.19
NFXL1-203ENST00000464756 POLR3FQ9H1D9 316 aaPredicted RBP13.84□□□□□ -0.19
NFXL1-203ENST00000464756 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
NFXL1-203ENST00000464756 TNNC2P02585 160 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 SREBF1P36956 1147 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 POP1Q99575 1024 aaKnown RBP13.83□□□□□ -0.2
NFXL1-203ENST00000464756 FGFBP2Q9BYJ0 223 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 ELP3Q9H9T3 547 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 DMGDHQ9UI17 866 aaKnown RBP13.83□□□□□ -0.2
NFXL1-203ENST00000464756 TTLL3Q9Y4R7 772 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 WNT10BO00744 389 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 CLDN3O15551 220 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 C4orf32Q8N8J7 132 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 FAM118BQ9BPY3 351 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 FGRP09769 529 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 SOX5P35711 763 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 MTMR9Q96QG7 549 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 DNAJC7Q99615 494 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
NFXL1-203ENST00000464756 TMX2Q9Y320 296 aa13.83□□□□□ -0.2
NFXL1-203ENST00000464756 DAPK3O43293 454 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ACSL3O95573 720 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 JAK3P52333 1124 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 DR1Q01658 176 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 MTM1Q13496 603 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 FAM160B1Q5W0V3 765 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ZNF280CQ8ND82 737 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 JPH1Q9HDC5 661 aaPredicted RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 TUFT1Q9NNX1 390 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 NKIRAS1Q9NYS0 192 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 TBX3O15119 743 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ATP8B1O43520 1251 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 CNGA1P29973 690 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 BFSP1Q12934 665 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ATP6V0A4Q9HBG4 840 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 AGPAT3Q9NRZ7 376 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 POC1B-GALNT4F8VUJ3 575 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 MEIS2O14770 477 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 CARSP49589 748 aaKnown RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 PPP2R5AQ15172 486 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 EDRF1Q3B7T1 1238 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 FAM84AQ96KN4 292 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 ADAM33Q9BZ11 813 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 KLHL11Q9NVR0 708 aa13.82□□□□□ -0.2
NFXL1-203ENST00000464756 NOC2LQ9Y3T9 749 aaKnown RBP13.82□□□□□ -0.2
NFXL1-203ENST00000464756 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 KRT14P02533 472 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 ZKSCAN8Q15776 578 aaPredicted RBP13.81□□□□□ -0.2
NFXL1-203ENST00000464756 CBWD2Q8IUF1 395 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 CCDC89Q8N998 374 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
NFXL1-203ENST00000464756 PSMD1Q99460 953 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 SEL1LQ9UBV2 794 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 SLC9A2Q9UBY0 812 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
NFXL1-203ENST00000464756 CTAGE3PQ8IX95 158 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
NFXL1-203ENST00000464756 MCPH1Q8NEM0 835 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 OR2W6PQ8NHA6 318 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 FMO2Q99518 471 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 CALN1Q9BXU9 219 aa13.81□□□□□ -0.2
NFXL1-203ENST00000464756 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
NFXL1-203ENST00000464756 EHD4Q9H223 541 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms