RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 USP15Q9Y4E8 981 aaPredicted RBP16.3■□□□□ 0.2
ALMS1-202ENST00000464408 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
ALMS1-202ENST00000464408 STK36Q9NRP7 1315 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 A0A0U1RQF3 1178 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
ALMS1-202ENST00000464408 LARGE1O95461 756 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 AK2P54819 239 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 PSMC5P62195 406 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 PPP2R5CQ13362 524 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 DUSP6Q16828 381 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 RHPN2Q8IUC4 686 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 RNF135Q8IUD6 432 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
ALMS1-202ENST00000464408 HAS1Q92839 578 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 LPPQ93052 612 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
ALMS1-202ENST00000464408 WDFY4Q6ZS81 3184 aa16.29■□□□□ 0.2
ALMS1-202ENST00000464408 NT5C1B-RDH14C9J2C7 533 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 HOXA2O43364 376 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 CCNT1O60563 726 aaKnown RBP16.28■□□□□ 0.2
ALMS1-202ENST00000464408 FDPSP14324 419 aaKnown RBP16.28■□□□□ 0.2
ALMS1-202ENST00000464408 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 NECAB1Q8N987 351 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 NLRP4Q96MN2 994 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 ZNF558Q96NG5 402 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 APOL5Q9BWW9 433 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 GCOM2Q9BZD3 368 aaPredicted RBP16.28■□□□□ 0.2
ALMS1-202ENST00000464408 ENTPD7Q9NQZ7 604 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 CDH22Q9UJ99 828 aa16.28■□□□□ 0.2
ALMS1-202ENST00000464408 ZBTB39O15060 712 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 CDKL5O76039 1030 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 PHKA2P46019 1235 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 NR5A1Q13285 461 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 KCNC3Q14003 757 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 CSPP1Q1MSJ5 1256 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 TMEM173Q86WV6 379 aaPredicted RBP16.27■□□□□ 0.2
ALMS1-202ENST00000464408 FAM177A1Q8N128 213 aaPredicted RBP16.27■□□□□ 0.2
ALMS1-202ENST00000464408 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 POP1Q99575 1024 aaKnown RBP16.27■□□□□ 0.2
ALMS1-202ENST00000464408 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 PIN4Q9Y237 131 aaKnown RBP16.27■□□□□ 0.2
ALMS1-202ENST00000464408 LZTS1Q9Y250 596 aa16.27■□□□□ 0.2
ALMS1-202ENST00000464408 B4GALT3O60512 393 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 EOMESO95936 686 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 QARSP47897 775 aaKnown RBP16.26■□□□□ 0.19
ALMS1-202ENST00000464408 DNM2P50570 870 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 FOSBP53539 338 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 SPIRE1Q08AE8 756 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 TWF2Q6IBS0 349 aaKnown RBP16.26■□□□□ 0.19
ALMS1-202ENST00000464408 SLC39A11Q8N1S5 342 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 SPG21Q9NZD8 308 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
ALMS1-202ENST00000464408 ORC3Q9UBD5 711 aaPredicted RBP16.26■□□□□ 0.19
ALMS1-202ENST00000464408 LOC730098B7Z3J9 87 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 WNT7AO00755 349 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 SFPQP23246 707 aaKnown RBP eCLIP16.25■□□□□ 0.19
ALMS1-202ENST00000464408 TECP42680 631 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 BCAR1P56945 870 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 ME3Q16798 604 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 HERC4Q5GLZ8 1057 aaPredicted RBP16.25■□□□□ 0.19
ALMS1-202ENST00000464408 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 SYCE2Q6PIF2 218 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 HFE2Q6ZVN8 426 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 ZNF410Q86VK4 478 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 BCL7CQ8WUZ0 217 aaPredicted RBP16.25■□□□□ 0.19
ALMS1-202ENST00000464408 SUSD6Q92537 303 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 TNFRSF25Q93038 417 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 DYDC2Q96IM9 177 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 CEP170P1Q96L14 293 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 CDCA3Q99618 268 aaPredicted RBP16.25■□□□□ 0.19
ALMS1-202ENST00000464408 LXNQ9BS40 222 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 S1PR5Q9H228 398 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 MINDY3Q9H8M7 445 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 CHST12Q9NRB3 414 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
ALMS1-202ENST00000464408 JAK2O60674 1132 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 ZC3H11AO75152 810 aaKnown RBP eCLIP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 NEFLP07196 543 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 P4HBP07237 508 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 SRGAP2CP0DJJ0 459 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 GCFC2P16383 781 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 PPM1AP35813 382 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 CYP4A11Q02928 519 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 PDE12Q6L8Q7 609 aaKnown RBP16.24■□□□□ 0.19
ALMS1-202ENST00000464408 ANKRD54Q6NXT1 300 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 TMEM184AQ6ZMB5 413 aa16.24■□□□□ 0.19
ALMS1-202ENST00000464408 CATSPER4Q7RTX7 472 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms