RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 VPS52Q8N1B4 723 aa10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 C12orf76Q8N812 135 aaPredicted RBP10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 BICD2Q8TD16 824 aa10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 GCOM2Q9BZD3 368 aaPredicted RBP10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 DZANK1Q9NVP4 752 aa10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
RN7SL541P-201ENST00000464317 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 PROB1E7EW31 1015 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 MSH4O15457 936 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 GAS7O60861 476 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 CSDE1O75534 798 aaKnown RBP10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 HMGB1P09429 215 aaKnown RBP10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 SFNP31947 248 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 JAK3P52333 1124 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 GIT2Q14161 759 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 KIAA1841Q6NSI8 718 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 CABP7Q86V35 215 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 RASEFQ8IZ41 740 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 ZDHHC14Q8IZN3 488 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 TMEM105Q8N8V8 129 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 AUTS2Q8WXX7 1259 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 LENG9Q96B70 501 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 TEKT3Q9BXF9 490 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 ZBP1Q9H171 429 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 SMOC2Q9H3U7 446 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 CHST12Q9NRB3 414 aa10.23□□□□□ -0.77
RN7SL541P-201ENST00000464317 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 CTSAP10619 480 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 SKIP12755 728 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 EPCAMP16422 314 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 SFPQP23246 707 aaKnown RBP eCLIP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 PHKA2P46019 1235 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 DNM2P50570 870 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 POLGP54098 1239 aaPredicted RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 UGCGQ16739 394 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 TSGA10IPQ3SY00 556 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 MTERF2Q49AM1 385 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 TWF2Q6IBS0 349 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 GLB1LQ6UWU2 654 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 ASCL5Q7RTU5 278 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 DDX53Q86TM3 631 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 TMEM173Q86WV6 379 aaPredicted RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 CCDC148Q8NFR7 591 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 LPPQ93052 612 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 ACSF2Q96CM8 615 aaPredicted RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 IGSF21Q96ID5 467 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 RIT2Q99578 217 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 INO80BQ9C086 356 aaPredicted RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 UNC45AQ9H3U1 944 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 CYP26B1Q9NR63 512 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 PIN4Q9Y237 131 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 INPP5FQ9Y2H2 1132 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 MYH9P35579 1960 aaKnown RBP10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 CACNA1HO95180 2353 aa10.22□□□□□ -0.77
RN7SL541P-201ENST00000464317 A0A087WZ62 844 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 PRR23AA6NEV1 266 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 GALTP07902 379 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 NBL1P41271 181 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 FOXK2Q01167 660 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 DRP2Q13474 957 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 TARBP2Q15633 366 aaKnown RBP10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 XKR3Q5GH77 459 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 NOMO2Q5JPE7 1267 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 TMC5Q6UXY8 1006 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 Q6ZUG5 572 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 MIER3Q7Z3K6 550 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 SLC22A17Q8WUG5 538 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 SLC5A5Q92911 643 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 BRF1Q92994 677 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 PHKBQ93100 1093 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 FDXACB1Q9BRP7 624 aaPredicted RBP10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 TRAIPQ9BWF2 469 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 GBP3Q9H0R5 595 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 NRDE2Q9H7Z3 1164 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 TBC1D13Q9NVG8 400 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 SUCLA2Q9P2R7 463 aaPredicted RBP10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 IRAK3Q9Y616 596 aa10.21□□□□□ -0.77
RN7SL541P-201ENST00000464317 USP34Q70CQ2 3546 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 DDX11L8A8MPP1 907 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 OFD1O75665 1012 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 CPA1P15085 419 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 KLRC2P26717 231 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 SLC11A1P49279 550 aa10.2□□□□□ -0.78
RN7SL541P-201ENST00000464317 RAB27AP51159 221 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms