RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 SPATA31C2B4DYI2 1134 aa15.44■□□□□ 0.06
C9orf3-211ENST00000463372 AXIN1O15169 862 aa15.44■□□□□ 0.06
C9orf3-211ENST00000463372 INSRRP14616 1297 aa15.44■□□□□ 0.06
C9orf3-211ENST00000463372 SRSF5Q13243 272 aaKnown RBP15.44■□□□□ 0.06
C9orf3-211ENST00000463372 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-211ENST00000463372 TNPO1Q92973 898 aaKnown RBP15.44■□□□□ 0.06
C9orf3-211ENST00000463372 KIF1BPQ96EK5 621 aa15.44■□□□□ 0.06
C9orf3-211ENST00000463372 MRPL9Q9BYD2 267 aaKnown RBP15.44■□□□□ 0.06
C9orf3-211ENST00000463372 KALRNO60229 2985 aa15.44■□□□□ 0.06
C9orf3-211ENST00000463372 CHURC1-FNTBB4DL54 471 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 FIBPO43427 364 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 DHX16O60231 1041 aaKnown RBP15.43■□□□□ 0.06
C9orf3-211ENST00000463372 CNPP09543 421 aaKnown RBP15.43■□□□□ 0.06
C9orf3-211ENST00000463372 SNHG28P0DPA3 235 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-211ENST00000463372 FNTBP49356 437 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 SH3PXD2AQ5TCZ1 1133 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 PARM1Q6UWI2 310 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 MTSS1LQ765P7 747 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 TMEM57Q8N5G2 664 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 RNF169Q8NCN4 708 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 HNRNPABQ99729 332 aaKnown RBP15.43■□□□□ 0.06
C9orf3-211ENST00000463372 CHRDQ9H2X0 955 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 SMARCAD1Q9H4L7 1026 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 MSRB2Q9Y3D2 182 aa15.43■□□□□ 0.06
C9orf3-211ENST00000463372 ZNF462Q96JM2 2506 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 M0R2C6 588 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 ZC3H11AO75152 810 aaKnown RBP eCLIP15.42■□□□□ 0.06
C9orf3-211ENST00000463372 STAM2O75886 525 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 GHRHRQ02643 423 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 FZD5Q13467 585 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 TMEM173Q86WV6 379 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-211ENST00000463372 ADGRF4Q8IZF3 695 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-211ENST00000463372 IGSF21Q96ID5 467 aa15.42■□□□□ 0.06
C9orf3-211ENST00000463372 SMIM35A0A1B0GVV1 85 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 RNF113AO15541 343 aaKnown RBP15.41■□□□□ 0.06
C9orf3-211ENST00000463372 RFPL2O75678 378 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 SSBP05455 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
C9orf3-211ENST00000463372 CEACAM1P13688 526 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 CXCL12P48061 93 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 CLLU1OSQ5K130 101 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 DAB2IPQ5VWQ8 1189 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 LARP1BQ659C4 914 aaKnown RBP15.41■□□□□ 0.06
C9orf3-211ENST00000463372 KIAA1211LQ6NV74 962 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 LONP2Q86WA8 852 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 HELQQ8TDG4 1101 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 TMEM40Q8WWA1 233 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 SEPT1Q8WYJ6 367 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-211ENST00000463372 SENP7Q9BQF6 1050 aa15.41■□□□□ 0.06
C9orf3-211ENST00000463372 NDRG2Q9UN36 371 aaKnown RBP15.41■□□□□ 0.06
C9orf3-211ENST00000463372 OPLAHO14841 1288 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 ZFYP08048 801 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-211ENST00000463372 MYBP10242 640 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 TROAPQ12815 778 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 CEP85Q6P2H3 762 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 FCHSD1Q86WN1 690 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 SAMD3Q8N6K7 520 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 LOXL4Q96JB6 756 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 MKNK1Q9BUB5 465 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 CDHR5Q9HBB8 845 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 MRPL17Q9NRX2 175 aaKnown RBP15.4■□□□□ 0.06
C9orf3-211ENST00000463372 TCP11L1Q9NUJ3 509 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 RTEL1Q9NZ71 1219 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 STK39Q9UEW8 545 aa15.4■□□□□ 0.06
C9orf3-211ENST00000463372 PCNX2A6NKB5 2137 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 HYAL3O43820 417 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-211ENST00000463372 ORC4O43929 436 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 GLUD1P00367 558 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 ADH1AP07327 375 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 ZSCAN20P17040 1043 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-211ENST00000463372 FSHRP23945 695 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 DSC3Q14574 896 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
C9orf3-211ENST00000463372 HEATR6Q6AI08 1181 aaKnown RBP15.39■□□□□ 0.05
C9orf3-211ENST00000463372 ECHDC2Q86YB7 292 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 TRAPPC12Q8WVT3 735 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 ZNF707Q96C28 371 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-211ENST00000463372 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 VAT1LQ9HCJ6 419 aa15.39■□□□□ 0.05
C9orf3-211ENST00000463372 PIEZO2Q9H5I5 2752 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 C4orf47A7E2U8 309 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 EPN2O95208 641 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 PLA2G2AP14555 144 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
C9orf3-211ENST00000463372 SATB1Q01826 763 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 PLCB4Q15147 1175 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 FAM228AQ86W67 206 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 KBTBD3Q8NAB2 608 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 LRIG1Q96JA1 1093 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 TTC14Q96N46 770 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 EDEM2Q9BV94 578 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 PHF20Q9BVI0 1012 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 HEBP1Q9NRV9 189 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 KLK13Q9UKR3 277 aa15.38■□□□□ 0.05
C9orf3-211ENST00000463372 CDH7Q9ULB5 785 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms