RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DZANK1Q9NVP4 752 aa8.83□□□□□ -1
SMC3-202ENST00000462899 DLGAP2Q9P1A6 1054 aa8.83□□□□□ -1
SMC3-202ENST00000462899 SLC9A2Q9UBY0 812 aa8.83□□□□□ -1
SMC3-202ENST00000462899 PUF60Q9UHX1 559 aaKnown RBP8.83□□□□□ -1
SMC3-202ENST00000462899 COL1A2P08123 1366 aa8.83□□□□□ -1
SMC3-202ENST00000462899 FAM208BQ5VWN6 2430 aa8.82□□□□□ -1
SMC3-202ENST00000462899 COL4A3Q01955 1670 aa8.82□□□□□ -1
SMC3-202ENST00000462899 DENND3A2RUS2 1198 aa8.82□□□□□ -1
SMC3-202ENST00000462899 KRBA1A5PL33 1030 aa8.82□□□□□ -1
SMC3-202ENST00000462899 N4BP1O75113 896 aaKnown RBP8.82□□□□□ -1
SMC3-202ENST00000462899 OATP04181 439 aa8.82□□□□□ -1
SMC3-202ENST00000462899 EPCAMP16422 314 aa8.82□□□□□ -1
SMC3-202ENST00000462899 SMARCA1P28370 1054 aa8.82□□□□□ -1
SMC3-202ENST00000462899 ACTR2P61160 394 aa8.82□□□□□ -1
SMC3-202ENST00000462899 ITGB3BPQ13352 177 aaPredicted RBP8.82□□□□□ -1
SMC3-202ENST00000462899 TDGQ13569 410 aa8.82□□□□□ -1
SMC3-202ENST00000462899 CWC27Q6UX04 472 aaKnown RBP8.82□□□□□ -1
SMC3-202ENST00000462899 TMC7Q7Z402 723 aa8.82□□□□□ -1
SMC3-202ENST00000462899 TMEM173Q86WV6 379 aaPredicted RBP8.82□□□□□ -1
SMC3-202ENST00000462899 LINC01465Q8N7H1 131 aa8.82□□□□□ -1
SMC3-202ENST00000462899 MAP3K14Q99558 947 aa8.82□□□□□ -1
SMC3-202ENST00000462899 OSBPL3Q9H4L5 887 aa8.82□□□□□ -1
SMC3-202ENST00000462899 KCNK12Q9HB15 430 aa8.82□□□□□ -1
SMC3-202ENST00000462899 ATP6V0A4Q9HBG4 840 aa8.82□□□□□ -1
SMC3-202ENST00000462899 KCNH7Q9NS40 1196 aa8.82□□□□□ -1
SMC3-202ENST00000462899 SPG21Q9NZD8 308 aa8.82□□□□□ -1
SMC3-202ENST00000462899 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
SMC3-202ENST00000462899 CEP295Q9C0D2 2601 aa8.82□□□□□ -1
SMC3-202ENST00000462899 ATRXP46100 2492 aa8.81□□□□□ -1
SMC3-202ENST00000462899 LAMA1P25391 3075 aa8.81□□□□□ -1
SMC3-202ENST00000462899 GPR182O15218 404 aa8.81□□□□□ -1
SMC3-202ENST00000462899 HOXA2O43364 376 aa8.81□□□□□ -1
SMC3-202ENST00000462899 NARSO43776 548 aaKnown RBP8.81□□□□□ -1
SMC3-202ENST00000462899 PAPLNO95428 1278 aa8.81□□□□□ -1
SMC3-202ENST00000462899 C22orf31O95567 290 aa8.81□□□□□ -1
SMC3-202ENST00000462899 CCNE2O96020 404 aa8.81□□□□□ -1
SMC3-202ENST00000462899 ATP4AP20648 1035 aa8.81□□□□□ -1
SMC3-202ENST00000462899 KLRC1P26715 233 aa8.81□□□□□ -1
SMC3-202ENST00000462899 SLC26A2P50443 739 aa8.81□□□□□ -1
SMC3-202ENST00000462899 STAT5BP51692 787 aa8.81□□□□□ -1
SMC3-202ENST00000462899 CRYBB1P53674 252 aaPredicted RBP8.81□□□□□ -1
SMC3-202ENST00000462899 ANTXR2P58335 489 aa8.81□□□□□ -1
SMC3-202ENST00000462899 KRT17Q04695 432 aa8.81□□□□□ -1
SMC3-202ENST00000462899 HDAC1Q13547 482 aaPredicted RBP8.81□□□□□ -1
SMC3-202ENST00000462899 ODR4Q5SWX8 454 aa8.81□□□□□ -1
SMC3-202ENST00000462899 GPR149Q86SP6 731 aa8.81□□□□□ -1
SMC3-202ENST00000462899 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
SMC3-202ENST00000462899 CCDC60Q8IWA6 550 aaPredicted RBP8.81□□□□□ -1
SMC3-202ENST00000462899 SIX5Q8N196 739 aa8.81□□□□□ -1
SMC3-202ENST00000462899 SUMF1Q8NBK3 374 aa8.81□□□□□ -1
SMC3-202ENST00000462899 CYP2W1Q8TAV3 490 aa8.81□□□□□ -1
SMC3-202ENST00000462899 TNPO1Q92973 898 aaKnown RBP8.81□□□□□ -1
SMC3-202ENST00000462899 CUL5Q93034 780 aa8.81□□□□□ -1
SMC3-202ENST00000462899 RILPL2Q969X0 211 aa8.81□□□□□ -1
SMC3-202ENST00000462899 OSMRQ99650 979 aa8.81□□□□□ -1
SMC3-202ENST00000462899 VN1R3Q9BXE9 311 aa8.81□□□□□ -1
SMC3-202ENST00000462899 AZI2Q9H6S1 392 aa8.81□□□□□ -1
SMC3-202ENST00000462899 DBR1Q9UK59 544 aaKnown RBP8.81□□□□□ -1
SMC3-202ENST00000462899 TAF6LQ9Y6J9 622 aa8.81□□□□□ -1
SMC3-202ENST00000462899 R4GN57 208 aa8.81□□□□□ -1
SMC3-202ENST00000462899 HBP1O60381 514 aa8.8□□□□□ -1
SMC3-202ENST00000462899 CYP21A2P08686 494 aa8.8□□□□□ -1
SMC3-202ENST00000462899 CTSAP10619 480 aa8.8□□□□□ -1
SMC3-202ENST00000462899 IBSPP21815 317 aaPredicted RBP8.8□□□□□ -1
SMC3-202ENST00000462899 UBE2SQ16763 222 aa8.8□□□□□ -1
SMC3-202ENST00000462899 KIZQ2M2Z5 673 aa8.8□□□□□ -1
SMC3-202ENST00000462899 ATAT1Q5SQI0 421 aa8.8□□□□□ -1
SMC3-202ENST00000462899 ABHD15Q6UXT9 468 aa8.8□□□□□ -1
SMC3-202ENST00000462899 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
SMC3-202ENST00000462899 MAML2Q8IZL2 1156 aaPredicted RBP8.8□□□□□ -1
SMC3-202ENST00000462899 IGDCC4Q8TDY8 1250 aa8.8□□□□□ -1
SMC3-202ENST00000462899 BCL7CQ8WUZ0 217 aaPredicted RBP8.8□□□□□ -1
SMC3-202ENST00000462899 MXRA8Q9BRK3 442 aa8.8□□□□□ -1
SMC3-202ENST00000462899 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
SMC3-202ENST00000462899 SFXN1Q9H9B4 322 aa8.8□□□□□ -1
SMC3-202ENST00000462899 SLC24A3Q9HC58 644 aa8.8□□□□□ -1
SMC3-202ENST00000462899 WNT16Q9UBV4 365 aa8.8□□□□□ -1
SMC3-202ENST00000462899 GINS2Q9Y248 185 aa8.8□□□□□ -1
SMC3-202ENST00000462899 NOTCH4Q99466 2003 aa8.8□□□□□ -1
SMC3-202ENST00000462899 TDRD15B5MCY1 1934 aaKnown RBP8.8□□□□□ -1
SMC3-202ENST00000462899 CNOT1A5YKK6 2376 aaKnown RBP8.79□□□□□ -1
SMC3-202ENST00000462899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.79□□□□□ -1
SMC3-202ENST00000462899 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
SMC3-202ENST00000462899 PLEKHA8P1O95397 391 aa8.79□□□□□ -1
SMC3-202ENST00000462899 SP9P0CG40 484 aa8.79□□□□□ -1
SMC3-202ENST00000462899 GLULP15104 373 aa8.79□□□□□ -1
SMC3-202ENST00000462899 POLGP54098 1239 aaPredicted RBP8.79□□□□□ -1
SMC3-202ENST00000462899 BCAR1P56945 870 aa8.79□□□□□ -1
SMC3-202ENST00000462899 WTAPQ15007 396 aa8.79□□□□□ -1
SMC3-202ENST00000462899 PTPN14Q15678 1187 aa8.79□□□□□ -1
SMC3-202ENST00000462899 ZNF484Q5JVG2 852 aa8.79□□□□□ -1
SMC3-202ENST00000462899 TMC5Q6UXY8 1006 aa8.79□□□□□ -1
SMC3-202ENST00000462899 C15orf39Q6ZRI6 1047 aa8.79□□□□□ -1
SMC3-202ENST00000462899 CCDC149Q6ZUS6 474 aa8.79□□□□□ -1
SMC3-202ENST00000462899 OTOP3Q7RTS5 596 aa8.79□□□□□ -1
SMC3-202ENST00000462899 VPS52Q8N1B4 723 aa8.79□□□□□ -1
SMC3-202ENST00000462899 DCLK2Q8N568 766 aa8.79□□□□□ -1
SMC3-202ENST00000462899 SRBD1Q8N5C6 995 aaKnown RBP8.79□□□□□ -1
SMC3-202ENST00000462899 PIBF1Q8WXW3 757 aa8.79□□□□□ -1
SMC3-202ENST00000462899 AUTS2Q8WXX7 1259 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms