RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CALML4Q96GE6 196 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 GUCD1Q96NT3 240 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 PCDHB7Q9Y5E2 793 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 E9PMD0 336 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 SLC26A4O43511 780 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 EYA4O95677 639 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 CYP11B2P19099 503 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 TAP1Q03518 808 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 DSC3Q14574 896 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 STK38Q15208 465 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 PTPAQ15257 358 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 SLC24A5Q71RS6 500 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 ASAP3Q8TDY4 903 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 MYLIPQ8WY64 445 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 USP28Q96RU2 1077 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 GAS2L1Q99501 681 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 PLIN2Q99541 437 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 MMTAG2Q9BU76 263 aaKnown RBP11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 CERS4Q9HA82 394 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 IFT122Q9HBG6 1241 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 DACT1Q9NYF0 836 aa11.75□□□□□ -0.53
TRAPPC12-213ENST00000461577 LRRIQ4A6NIV6 560 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 C9IYK1 514 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 ERLIN2O94905 339 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 F13A1P00488 732 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 SSBP05455 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 FOSL2P15408 326 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 GLRA2P23416 452 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 PTENP60484 403 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 GRIN1Q05586 938 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 GRB10Q13322 594 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 CAPSQ13938 189 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 BTG3Q14201 252 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 HYIQ5T013 277 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 TWF2Q6IBS0 349 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 PNMA5Q96PV4 448 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 TGS1Q96RS0 853 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 PIN4Q9Y237 131 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 SRPRBQ9Y5M8 271 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 LAMA2P24043 3122 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 SZT2Q5T011 3432 aa11.74□□□□□ -0.53
TRAPPC12-213ENST00000461577 LINC01553A4QN01 128 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 DGKIO75912 1065 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 TXLNAP40222 546 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 ERVK-21P61565 698 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 FAM189BP81408 668 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 MYO9BQ13459 2157 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 PPP2R5AQ15172 486 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 ADGRA3Q8IWK6 1321 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 CMTR2Q8IYT2 770 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 RNF169Q8NCN4 708 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 KIFAP3Q92845 792 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 IFT74Q96LB3 600 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 SAMD11Q96NU1 681 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 CSRNP2Q9H175 543 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 ELAC1Q9H777 363 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 MINDY3Q9H8M7 445 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 AGPAT5Q9NUQ2 364 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 TFIP11Q9UBB9 837 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 STXBP5LQ9Y2K9 1186 aa11.73□□□□□ -0.53
TRAPPC12-213ENST00000461577 HOXA2O43364 376 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 SKIP12755 728 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 IGFBP4P22692 258 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 NASPP49321 788 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 SLC39A14Q15043 492 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 TMEM119Q4V9L6 283 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 RINT1Q6NUQ1 792 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 KRI1Q8N9T8 703 aaKnown RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 DEPTORQ8TB45 409 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms