RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 EMC2Q15006 297 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 SAFBQ15424 915 aaKnown RBP eCLIP26.35■■□□□ 1.81
LMBR1-214ENST00000461469 ZNF174Q15697 407 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 XKR9Q5GH70 373 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 CLLU1OSQ5K130 101 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 ZNF410Q86VK4 478 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 PRPF31Q8WWY3 499 aaKnown RBP26.35■■□□□ 1.81
LMBR1-214ENST00000461469 UHRF1Q96T88 793 aaPredicted RBP26.35■■□□□ 1.81
LMBR1-214ENST00000461469 FOXP1Q9H334 677 aaPredicted RBP26.35■■□□□ 1.81
LMBR1-214ENST00000461469 MINDY3Q9H8M7 445 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 PCDHGC5Q9Y5F6 944 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 COL4A3BPQ9Y5P4 624 aa26.35■■□□□ 1.81
LMBR1-214ENST00000461469 LYPLA2O95372 231 aa26.34■■□□□ 1.81
LMBR1-214ENST00000461469 ZSCAN20P17040 1043 aaPredicted RBP26.34■■□□□ 1.81
LMBR1-214ENST00000461469 AAK1Q2M2I8 961 aa26.34■■□□□ 1.81
LMBR1-214ENST00000461469 SLC7A3Q8WY07 619 aa26.34■■□□□ 1.81
LMBR1-214ENST00000461469 LMAN2LQ9H0V9 348 aa26.34■■□□□ 1.81
LMBR1-214ENST00000461469 A0A0U1RQF3 1178 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 SPATA31C1P0DKV0 1188 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 KCNA5P22460 613 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 RFC5P40937 340 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 HYAL1Q12794 435 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 RNF169Q8NCN4 708 aa26.33■■□□□ 1.81
LMBR1-214ENST00000461469 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.33■■□□□ 1.81
LMBR1-214ENST00000461469 NCOR1O75376 2440 aa26.33■■□□□ 1.8
LMBR1-214ENST00000461469 LAMTOR4Q0VGL1 99 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 ADGRD2Q7Z7M1 963 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 NOSTRINQ8IVI9 506 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 FAM184AQ8NB25 1140 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 COLGALT1Q8NBJ5 622 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 PIGOQ8TEQ8 1089 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 POF1BQ8WVV4 589 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 JPH2Q9BR39 696 aaPredicted RBP26.32■■□□□ 1.8
LMBR1-214ENST00000461469 TMEM117Q9H0C3 514 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 PPME1Q9Y570 386 aa26.32■■□□□ 1.8
LMBR1-214ENST00000461469 MEIS3P2A8K0S8 358 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 H3BQ06 376 aaPredicted RBP26.31■■□□□ 1.8
LMBR1-214ENST00000461469 TNFRSF10AO00220 468 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 MED24O75448 989 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 SRGAP2CP0DJJ0 459 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 LTBRP36941 435 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 PBX3P40426 434 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 TOB1P50616 345 aaPredicted RBP26.31■■□□□ 1.8
LMBR1-214ENST00000461469 CDC42EP1Q00587 391 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 TTC38Q5R3I4 469 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 OTUD6AQ7L8S5 288 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 FERMT3Q86UX7 667 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 C4orf32Q8N8J7 132 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 IL27Q8NEV9 243 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 PSPC1Q8WXF1 523 aaKnown RBP26.31■■□□□ 1.8
LMBR1-214ENST00000461469 TMX3Q96JJ7 454 aa26.31■■□□□ 1.8
LMBR1-214ENST00000461469 PIN4Q9Y237 131 aaKnown RBP26.31■■□□□ 1.8
LMBR1-214ENST00000461469 SFPQP23246 707 aaKnown RBP eCLIP26.3■■□□□ 1.8
LMBR1-214ENST00000461469 RARRES1P49788 294 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 DLX2Q07687 328 aaPredicted RBP26.3■■□□□ 1.8
LMBR1-214ENST00000461469 LEXMQ3ZCV2 418 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 LONRF3Q496Y0 759 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 NAALADL2Q58DX5 795 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 NEK9Q8TD19 979 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 HELQQ8TDG4 1101 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 LPPQ93052 612 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 PABPC5Q96DU9 382 aaKnown RBP26.3■■□□□ 1.8
LMBR1-214ENST00000461469 TBC1D32Q96NH3 1257 aa26.3■■□□□ 1.8
LMBR1-214ENST00000461469 LINC01565O15544 149 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 OR52Z1P0C646 297 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 U2AF2P26368 475 aaKnown RBP eCLIP26.29■■□□□ 1.87e-7■■■■□ 20.4
LMBR1-214ENST00000461469 TECP42680 631 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 PHKA2P46019 1235 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 CTC1Q2NKJ3 1217 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 SPOUT1Q5T280 376 aaKnown RBP26.29■■□□□ 1.8
LMBR1-214ENST00000461469 CATSPER4Q7RTX7 472 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 CATSPER3Q86XQ3 398 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 ASAP3Q8TDY4 903 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 MTRQ99707 1265 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 CHST12Q9NRB3 414 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 ANKEF1Q9NU02 776 aa26.29■■□□□ 1.8
LMBR1-214ENST00000461469 HOXA11P31270 313 aaPredicted RBP26.28■■□□□ 1.8
LMBR1-214ENST00000461469 RNF149Q8NC42 400 aa26.28■■□□□ 1.8
LMBR1-214ENST00000461469 TRAIPQ9BWF2 469 aa26.28■■□□□ 1.8
LMBR1-214ENST00000461469 AGPAT5Q9NUQ2 364 aa26.28■■□□□ 1.8
LMBR1-214ENST00000461469 RNF216Q9NWF9 866 aaPredicted RBP26.28■■□□□ 1.8
LMBR1-214ENST00000461469 CLDND1Q9NY35 253 aa26.28■■□□□ 1.8
LMBR1-214ENST00000461469 DACT1Q9NYF0 836 aa26.28■■□□□ 1.8
LMBR1-214ENST00000461469 ST18O60284 1047 aa26.27■■□□□ 1.8
LMBR1-214ENST00000461469 FGF18O76093 207 aa26.27■■□□□ 1.8
LMBR1-214ENST00000461469 IL9P15248 144 aa26.27■■□□□ 1.8
LMBR1-214ENST00000461469 TWF2Q6IBS0 349 aaKnown RBP26.27■■□□□ 1.8
LMBR1-214ENST00000461469 INO80BQ9C086 356 aaPredicted RBP26.27■■□□□ 1.8
LMBR1-214ENST00000461469 PCDHB6Q9Y5E3 794 aa26.27■■□□□ 1.8
LMBR1-214ENST00000461469 PCDHB12Q9Y5F1 795 aa26.27■■□□□ 1.8
LMBR1-214ENST00000461469 EOMESO95936 686 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 ARL2P36404 184 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 ERVFC1P60507 584 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 ECM1Q16610 540 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 UBXN11Q5T124 520 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 POTEGQ6S5H5 508 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 EP400NLQ6ZTU2 488 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 SRGAP1Q7Z6B7 1085 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 EXOC8Q8IYI6 725 aa26.26■■□□□ 1.79
LMBR1-214ENST00000461469 TCP11Q8WWU5 503 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms