RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ENAHQ8N8S7 591 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 GIMAP8Q8ND71 665 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 NSUN7Q8NE18 718 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DDX17Q92841 729 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TRIM62Q9BVG3 475 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 FTOQ9C0B1 505 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 CAB39Q9Y376 341 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 DNAJC6O75061 913 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PDHA1P08559 390 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 MYBL1P10243 752 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TCF3P15923 654 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 VCPP55072 806 aaKnown RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PPP2R2AP63151 447 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 E2F4Q16254 413 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TBC1D10BQ4KMP7 808 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-205ENST00000461221 FAM47EQ6ZV65 393 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 LINC00301Q8NCQ3 95 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 RASGRP4Q8TDF6 673 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PAGE5Q96GU1 130 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 POLE3Q9NRF9 147 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 TRAF3IP3Q9Y228 551 aa9.57□□□□□ -0.88
BRCA1-205ENST00000461221 PDE8BO95263 885 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 S100A5P33763 92 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 POU5F1BQ06416 359 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 RAD51Q06609 339 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 DMC1Q14565 340 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 BEND6Q5SZJ8 279 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 CATSPER4Q7RTX7 472 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SLC7A5P2Q9GIP4 190 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 ECT2Q9H8V3 914 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 EHD2Q9NZN4 543 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SNX24Q9Y343 169 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 COL17A1Q9UMD9 1497 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 GMNCA6NCL1 334 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 RASSF10A6NK89 507 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PJA2O43164 708 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PRPF4O43172 522 aaKnown RBP eCLIP9.56□□□□□ -0.885e-17■■■■■ 29.7
BRCA1-205ENST00000461221 ASIC4Q96FT7 647 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SH3GLB2Q9NR46 395 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SAMSN1Q9NSI8 373 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PALD1Q9ULE6 856 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 UBE4BO95155 1302 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 ARIH2O95376 493 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 AARS2Q5JTZ9 985 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SP110Q9HB58 689 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 DNAJC12Q9UKB3 198 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 CCDC195A0A1B0GUA6 201 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 HUS1O60921 280 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PALMO75781 387 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 KRT7P08729 469 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 TBXAS1P24557 533 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PDCLQ13371 301 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 DEPDC1Q5TB30 811 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PROM2Q8N271 834 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 BEST2Q8NFU1 509 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PDCD6IPQ8WUM4 868 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 TGS1Q96RS0 853 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 TSSK1BQ9BXA7 367 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 OSBPL1AQ9BXW6 950 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 SARS2Q9NP81 518 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 BFARQ9NZS9 450 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 IP6K2Q9UHH9 426 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 RCOR1Q9UKL0 485 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 GPATCH8Q9UKJ3 1502 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PNMA6FA0A0J9YX94 578 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 FAM187AA6NFU0 413 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 KCNA6P17658 529 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 HSPA2P54652 639 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 PRAMEP78395 509 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 DDIASQ8IXT1 998 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 URGCPQ8TCY9 931 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 THOC1Q96FV9 657 aaKnown RBP9.56□□□□□ -0.88
BRCA1-205ENST00000461221 WWP1Q9H0M0 922 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 BLOC1S6Q9UL45 172 aa9.56□□□□□ -0.88
BRCA1-205ENST00000461221 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 GOLGA8TH3BQL2 631 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 GGPS1O95749 300 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 SDC4P31431 198 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 CHRNA3P32297 505 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 STXBP2Q15833 593 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 ZNF699Q32M78 642 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PLD3Q8IV08 490 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 TTC30BQ8N4P2 665 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PPM1NQ8N819 430 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 MCPH1Q8NEM0 835 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 RBM46Q8TBY0 533 aaKnown RBP9.55□□□□□ -0.88
BRCA1-205ENST00000461221 BRIP1Q9BX63 1249 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 USP21Q9UK80 565 aa9.55□□□□□ -0.88
BRCA1-205ENST00000461221 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms