RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 PDE12Q6L8Q7 609 aaKnown RBP16.51■□□□□ 0.23
NCK1-202ENST00000460960 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 NIPA1Q7RTP0 329 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 NEK8Q86SG6 692 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 CKAP2LQ8IYA6 745 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 TMEM40Q8WWA1 233 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 OSMRQ99650 979 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 IRF2BPLQ9H1B7 796 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 FOXP1Q9H334 677 aaPredicted RBP16.51■□□□□ 0.23
NCK1-202ENST00000460960 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
NCK1-202ENST00000460960 PUF60Q9UHX1 559 aaKnown RBP16.51■□□□□ 0.23
NCK1-202ENST00000460960 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
NCK1-202ENST00000460960 H3BQV1 296 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 GPR182O15218 404 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 HBP1O60381 514 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 TOB1P50616 345 aaPredicted RBP16.5■□□□□ 0.23
NCK1-202ENST00000460960 KIZQ2M2Z5 673 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 PDXDC2PQ6P474 469 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 METTL13Q8N6R0 699 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
NCK1-202ENST00000460960 KIF3AQ9Y496 699 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 WDR81Q562E7 1941 aa16.5■□□□□ 0.23
NCK1-202ENST00000460960 C9IYK1 514 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 FSCN2O14926 492 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 CCNT1O60563 726 aaKnown RBP16.49■□□□□ 0.23
NCK1-202ENST00000460960 CCNE2O96020 404 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 PBX3P40426 434 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 SLC26A2P50443 739 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 PKP1Q13835 747 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 Q4G0T1 1027 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 TMC7Q7Z402 723 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 KIAA0319LQ8IZA0 1049 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 RNF169Q8NCN4 708 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 KREMEN2Q8NCW0 462 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 ETNPPLQ8TBG4 499 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 CWH43Q9H720 699 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 ZNF302Q9NR11 478 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 TMEM161AQ9NX61 479 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 DDX25Q9UHL0 483 aaKnown RBP16.49■□□□□ 0.23
NCK1-202ENST00000460960 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 MTMR6Q9Y217 621 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 NR2E1Q9Y466 385 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
NCK1-202ENST00000460960 HIDE1A8MVS5 230 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 IPO5O00410 1097 aaKnown RBP16.48■□□□□ 0.23
NCK1-202ENST00000460960 VTNP04004 478 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 SYCE2Q6PIF2 218 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 FAM228AQ86W67 206 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 CCDC60Q8IWA6 550 aaPredicted RBP16.48■□□□□ 0.23
NCK1-202ENST00000460960 RIPOR3Q96MK2 946 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 ZNF577Q9BSK1 485 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 TCEAL9Q9UHQ7 104 aa16.48■□□□□ 0.23
NCK1-202ENST00000460960 ZFHX2Q9C0A1 2572 aaPredicted RBP16.48■□□□□ 0.23
NCK1-202ENST00000460960 HSP90AA1P07900 732 aaKnown RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 CRYBB1P53674 252 aaPredicted RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 KRT17Q04695 432 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MTMR3Q13615 1198 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 ZNF174Q15697 407 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 ZNF484Q5JVG2 852 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 FOXD4L5Q5VV16 416 aaPredicted RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 PPP4R3AQ6IN85 833 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 FAM173BQ6P4H8 233 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 KCNT2Q6UVM3 1135 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 FOXD4L4Q8WXT5 416 aaPredicted RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 HAS1Q92839 578 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 CASP10Q92851 521 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 SLC5A5Q92911 643 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 TMEM117Q9H0C3 514 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 KCNMB3Q9NPA1 279 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 NGRNQ9NPE2 291 aaKnown RBP16.47■□□□□ 0.23
NCK1-202ENST00000460960 LZTS1Q9Y250 596 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 COL1A2P08123 1366 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MYO10Q9HD67 2058 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
NCK1-202ENST00000460960 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.23
NCK1-202ENST00000460960 HOXA2O43364 376 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 ATG7O95352 703 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 HOXB8P17481 243 aaPredicted RBP16.46■□□□□ 0.23
NCK1-202ENST00000460960 MCM7P33993 719 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 PLCB3Q01970 1234 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 RESTQ13127 1097 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 ABHD15Q6UXT9 468 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 TMEM184AQ6ZMB5 413 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 LRRC43Q8N309 656 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
NCK1-202ENST00000460960 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms