RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 B4GALT4O60513 344 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 FBXO21O94952 628 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 ENO2P09104 434 aaPredicted RBP4.63□□□□□ -1.67
RFC4-211ENST00000460408 IARSP41252 1262 aaKnown RBP4.63□□□□□ -1.67
RFC4-211ENST00000460408 GPR3P46089 330 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 MCL1Q07820 350 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 NFATC3Q12968 1075 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 SKIDA1Q1XH10 827 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 ZBTB41Q5SVQ8 909 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 VASNQ6EMK4 673 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 TMC5Q6UXY8 1006 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 KANSL1Q7Z3B3 1105 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 CXorf67Q86X51 503 aaPredicted RBP4.63□□□□□ -1.67
RFC4-211ENST00000460408 PHYKPLQ8IUZ5 450 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 RAVER1Q8IY67 606 aaKnown RBP4.63□□□□□ -1.67
RFC4-211ENST00000460408 HIPK4Q8NE63 616 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 MAML3Q96JK9 1138 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 TMEM209Q96SK2 561 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 POFUT1Q9H488 388 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 INCENPQ9NQS7 918 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 GALNT8Q9NY28 637 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 ARHGAP28Q9P2N2 729 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 FTSJ1Q9UET6 329 aa4.63□□□□□ -1.67
RFC4-211ENST00000460408 NOC2LQ9Y3T9 749 aaKnown RBP4.63□□□□□ -1.67
RFC4-211ENST00000460408 TRIM75PA6NK02 468 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 IL18BPO95998 194 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 RGS3P49796 1198 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 NEK2P51955 445 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 MANFP55145 182 aaKnown RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 TGFB2P61812 414 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 KRT85P78386 507 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 PURAQ00577 322 aaKnown RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 SLC6A3Q01959 620 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 STILQ15468 1287 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 ABCB5Q2M3G0 1257 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 TTC38Q5R3I4 469 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 LRSAM1Q6UWE0 723 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 C7orf31Q8N865 590 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 C1orf162Q8NEQ5 155 aaPredicted RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 ERCC4Q92889 916 aaPredicted RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 E2F7Q96AV8 911 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 SMAD5Q99717 465 aaKnown RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 SLC13A1Q9BZW2 595 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 BARX1Q9HBU1 254 aaPredicted RBP4.62□□□□□ -1.67
RFC4-211ENST00000460408 KCND1Q9NSA2 647 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 ADAM29Q9UKF5 820 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 CROTQ9UKG9 612 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 TMPRSS11EQ9UL52 423 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 SPEF1Q9Y4P9 236 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 PPP2R3BQ9Y5P8 575 aa4.62□□□□□ -1.67
RFC4-211ENST00000460408 H2AFYO75367 372 aaKnown RBP4.61□□□□□ -1.67
RFC4-211ENST00000460408 MAFO75444 373 aaPredicted RBP4.61□□□□□ -1.67
RFC4-211ENST00000460408 PRPF6O94906 941 aaKnown RBP4.61□□□□□ -1.67
RFC4-211ENST00000460408 RBP3P10745 1247 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 COL6A1P12109 1028 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 ECE1P42892 770 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 EPHB1P54762 984 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 SCAND1P57086 179 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 IL13RA1P78552 427 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 ROM1Q03395 351 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 FOXE3Q13461 319 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 FHL2Q14192 279 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 FSCN1Q16658 493 aaKnown RBP4.61□□□□□ -1.67
RFC4-211ENST00000460408 MIIPQ5JXC2 388 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 KANK2Q63ZY3 851 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 SLFN12LQ6IEE8 588 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 UNQ6494/PRO21346Q6UXR6 183 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 ESPNLQ6ZVH7 1005 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 LYSMD2Q8IV50 215 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 JDP2Q8WYK2 163 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 ACAP3Q96P50 834 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 TUBGCP5Q96RT8 1024 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 MYL10Q9BUA6 226 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 BTBD2Q9BX70 525 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 ZNF341Q9BYN7 854 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 SEC61A2Q9H9S3 476 aa4.61□□□□□ -1.67
RFC4-211ENST00000460408 SHTN1A0MZ66 631 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PRSS38A1L453 326 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 GOLGA8AA7E2F4 631 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 GOLGA8BA8MQT2 603 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PCDHGA12O60330 932 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
RFC4-211ENST00000460408 CNOT4O95628 575 aaKnown RBP4.6□□□□□ -1.67
RFC4-211ENST00000460408 MT-CO1P00395 513 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 ENPP1P22413 925 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 NFE2Q16621 373 aaPredicted RBP4.6□□□□□ -1.67
RFC4-211ENST00000460408 HS1BP3Q53T59 392 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PITRM1Q5JRX3 1037 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PHF19Q5T6S3 580 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PRAMEF9Q5VWM5 478 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 KIAA1841Q6NSI8 718 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 TRMT10BQ6PF06 316 aaKnown RBP4.6□□□□□ -1.67
RFC4-211ENST00000460408 SLC41A1Q8IVJ1 513 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 CHMP4CQ96CF2 233 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 FUBP3Q96I24 572 aaKnown RBP eCLIP4.6□□□□□ -1.67
RFC4-211ENST00000460408 PITHD1Q9GZP4 211 aaPredicted RBP4.6□□□□□ -1.67
RFC4-211ENST00000460408 WNT8AQ9H1J5 351 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 OR10A5Q9H207 317 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 PRDM12Q9H4Q4 367 aa4.6□□□□□ -1.67
RFC4-211ENST00000460408 CCM2LQ9NUG4 571 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms