RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 COG5Q9UP83 839 aa26.43■■□□□ 1.82
HOXB3-202ENST00000460160 TBKBP1A7MCY6 615 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 GRM6O15303 877 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 SPATA31C1P0DKV0 1188 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 SFPQP23246 707 aaKnown RBP eCLIP26.42■■□□□ 1.82
HOXB3-202ENST00000460160 ECHDC2Q86YB7 292 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 HLA-CQ95604 372 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 INO80BQ9C086 356 aaPredicted RBP26.42■■□□□ 1.82
HOXB3-202ENST00000460160 XPNPEP1Q9NQW7 623 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 ANKEF1Q9NU02 776 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 RNF19AQ9NV58 838 aa26.42■■□□□ 1.82
HOXB3-202ENST00000460160 NOL7Q9UMY1 257 aaKnown RBP26.42■■□□□ 1.82
HOXB3-202ENST00000460160 TECP42680 631 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 TOB1P50616 345 aaPredicted RBP26.41■■□□□ 1.82
HOXB3-202ENST00000460160 LAMTOR4Q0VGL1 99 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 TIGD5Q53EQ6 642 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 C4orf32Q8N8J7 132 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 P2RX5Q93086 422 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 MTRQ99707 1265 aa26.41■■□□□ 1.82
HOXB3-202ENST00000460160 GJB2P29033 226 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 PIGOQ8TEQ8 1089 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 TCP11Q8WWU5 503 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 SYMPKQ92797 1274 aaKnown RBP26.4■■□□□ 1.82
HOXB3-202ENST00000460160 CHST12Q9NRB3 414 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 DACT1Q9NYF0 836 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 PLXNA4Q9HCM2 1894 aa26.4■■□□□ 1.82
HOXB3-202ENST00000460160 A0A087WWV3 80 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 A0A0U1RQF3 1178 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 MED24O75448 989 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 RARRES1P49788 294 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 ZNF598Q86UK7 904 aaKnown RBP26.39■■□□□ 1.82
HOXB3-202ENST00000460160 FERMT3Q86UX7 667 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 CATSPER3Q86XQ3 398 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 LMAN2LQ9H0V9 348 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 TUFT1Q9NNX1 390 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 ALG13Q9NP73 1137 aaKnown RBP26.39■■□□□ 1.82
HOXB3-202ENST00000460160 HCSTQ9UBK5 93 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 PLAGL2Q9UPG8 496 aa26.39■■□□□ 1.82
HOXB3-202ENST00000460160 SRGAP2CP0DJJ0 459 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 ATF7P17544 494 aaPredicted RBP26.39■■□□□ 1.81
HOXB3-202ENST00000460160 NAALADL2Q58DX5 795 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 CATSPER4Q7RTX7 472 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 CASD1Q96PB1 797 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 POLR3CQ9BUI4 534 aaPredicted RBP26.39■■□□□ 1.81
HOXB3-202ENST00000460160 TMEM117Q9H0C3 514 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 MINDY3Q9H8M7 445 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 PCDHB6Q9Y5E3 794 aa26.39■■□□□ 1.81
HOXB3-202ENST00000460160 HOXA2O43364 376 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 DGAT1O75907 488 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 ITGB1P05556 798 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 XRCC6P12956 609 aaKnown RBP eCLIP26.38■■□□□ 1.818e-6■■□□□ 12.6
HOXB3-202ENST00000460160 AAK1Q2M2I8 961 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 KLHL23Q8NBE8 558 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 RNF149Q8NC42 400 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 TRAIPQ9BWF2 469 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 BACH2Q9BYV9 841 aa26.38■■□□□ 1.81
HOXB3-202ENST00000460160 NSUN3Q9H649 340 aaKnown RBP26.38■■□□□ 1.81
HOXB3-202ENST00000460160 TYW1Q9NV66 732 aaKnown RBP26.38■■□□□ 1.81
HOXB3-202ENST00000460160 PIN4Q9Y237 131 aaKnown RBP26.38■■□□□ 1.81
HOXB3-202ENST00000460160 ASAP2O43150 1006 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 KCNQ1P51787 676 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 CAMK1Q14012 370 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 TCEAL5Q5H9L2 206 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 CLLU1OSQ5K130 101 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 SRGAP1Q7Z6B7 1085 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 RNF169Q8NCN4 708 aa26.37■■□□□ 1.81
HOXB3-202ENST00000460160 CCDC43Q96MW1 224 aaKnown RBP26.37■■□□□ 1.81
HOXB3-202ENST00000460160 EOMESO95936 686 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 DNAJB1P25685 340 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 RPA1P27694 616 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 PHKA2P46019 1235 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 FXR2P51116 673 aaKnown RBP eCLIP26.36■■□□□ 1.81
HOXB3-202ENST00000460160 PTGDRQ13258 359 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 MCTP1Q6DN14 999 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 TWF2Q6IBS0 349 aaKnown RBP26.36■■□□□ 1.81
HOXB3-202ENST00000460160 POTEGQ6S5H5 508 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 ERMNQ8TAM6 284 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 SPPL3Q8TCT6 385 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 CWH43Q9H720 699 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 UBE2ZQ9H832 354 aaPredicted RBP26.36■■□□□ 1.81
HOXB3-202ENST00000460160 AGPAT5Q9NUQ2 364 aa26.36■■□□□ 1.81
HOXB3-202ENST00000460160 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.35■■□□□ 1.81
HOXB3-202ENST00000460160 BMP1P13497 986 aa26.35■■□□□ 1.81
HOXB3-202ENST00000460160 MXD4Q14582 209 aaPredicted RBP26.35■■□□□ 1.81
HOXB3-202ENST00000460160 SPOUT1Q5T280 376 aaKnown RBP26.35■■□□□ 1.81
HOXB3-202ENST00000460160 LRRC55Q6ZSA7 311 aa26.35■■□□□ 1.81
HOXB3-202ENST00000460160 ASAP3Q8TDY4 903 aa26.35■■□□□ 1.81
HOXB3-202ENST00000460160 DBR1Q9UK59 544 aaKnown RBP26.35■■□□□ 1.81
HOXB3-202ENST00000460160 SMC3Q9UQE7 1217 aa26.35■■□□□ 1.81
HOXB3-202ENST00000460160 C5orf42Q9H799 3197 aa26.35■■□□□ 1.81
HOXB3-202ENST00000460160 ARL2P36404 184 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 ABI1Q8IZP0 508 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 COLGALT1Q8NBJ5 622 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 ADAMTS19Q8TE59 1207 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 NACC1Q96RE7 527 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 PCDHB12Q9Y5F1 795 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 H3BQV1 296 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 USO1O60763 962 aaKnown RBP26.34■■□□□ 1.81
HOXB3-202ENST00000460160 CSPG5O95196 566 aa26.34■■□□□ 1.81
HOXB3-202ENST00000460160 PTENP60484 403 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms