RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TBKBP1A7MCY6 615 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 ASAP2O43150 1006 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 CSDE1O75534 798 aaKnown RBP17.98■□□□□ 0.47
COL7A1-203ENST00000459756 XRCC6P12956 609 aaKnown RBP eCLIP17.98■□□□□ 0.47
COL7A1-203ENST00000459756 FGFR4P22455 802 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 FAM102BQ5T8I3 360 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
COL7A1-203ENST00000459756 MTRQ99707 1265 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 IFT122Q9HBG6 1241 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 TUFT1Q9NNX1 390 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 KIAA1671Q9BY89 1806 aa17.98■□□□□ 0.47
COL7A1-203ENST00000459756 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 GRM6O15303 877 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 DGAT1O75907 488 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 TECP42680 631 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 TFF2Q03403 129 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 LAMTOR4Q0VGL1 99 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 ERMNQ8TAM6 284 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 POLR3CQ9BUI4 534 aaPredicted RBP17.97■□□□□ 0.47
COL7A1-203ENST00000459756 TRAIPQ9BWF2 469 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 TMEM117Q9H0C3 514 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 AAASQ9NRG9 546 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
COL7A1-203ENST00000459756 PLAGL2Q9UPG8 496 aa17.97■□□□□ 0.47
COL7A1-203ENST00000459756 EOMESO95936 686 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 SRGAP2CP0DJJ0 459 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 SPATA31C1P0DKV0 1188 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 FGFR1P11362 822 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 GJB2P29033 226 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 RARRES1P49788 294 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
COL7A1-203ENST00000459756 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 SRGAP1Q7Z6B7 1085 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 FERMT3Q86UX7 667 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 NSUN3Q9H649 340 aaKnown RBP17.96■□□□□ 0.47
COL7A1-203ENST00000459756 XPNPEP1Q9NQW7 623 aa17.96■□□□□ 0.47
COL7A1-203ENST00000459756 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.96■□□□□ 0.47
COL7A1-203ENST00000459756 SKIP12755 728 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 RPA1P27694 616 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 TOB1P50616 345 aaPredicted RBP17.95■□□□□ 0.46
COL7A1-203ENST00000459756 FXR2P51116 673 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL7A1-203ENST00000459756 MCTP1Q6DN14 999 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 TWF2Q6IBS0 349 aaKnown RBP17.95■□□□□ 0.46
COL7A1-203ENST00000459756 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
COL7A1-203ENST00000459756 ABI1Q8IZP0 508 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 C4orf32Q8N8J7 132 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 KLHL23Q8NBE8 558 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 RNF169Q8NCN4 708 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 PIGOQ8TEQ8 1089 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 NACC1Q96RE7 527 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 RNF19AQ9NV58 838 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 PIN4Q9Y237 131 aaKnown RBP17.95■□□□□ 0.46
COL7A1-203ENST00000459756 PCDHB12Q9Y5F1 795 aa17.95■□□□□ 0.46
COL7A1-203ENST00000459756 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 H3BQV1 296 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 LAD1O00515 517 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 MED24O75448 989 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 ITGB1P05556 798 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 MUTP22033 750 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 PHKA2P46019 1235 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 TFDP1Q14186 410 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 NBR1Q14596 966 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 CSPP1Q1MSJ5 1256 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 TCEAL5Q5H9L2 206 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 SPOUT1Q5T280 376 aaKnown RBP17.94■□□□□ 0.46
COL7A1-203ENST00000459756 HAUS3Q68CZ6 603 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 RNF149Q8NC42 400 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 CASD1Q96PB1 797 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 ALG13Q9NP73 1137 aaKnown RBP17.94■□□□□ 0.46
COL7A1-203ENST00000459756 AGPAT5Q9NUQ2 364 aa17.94■□□□□ 0.46
COL7A1-203ENST00000459756 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
COL7A1-203ENST00000459756 DBR1Q9UK59 544 aaKnown RBP17.94■□□□□ 0.46
COL7A1-203ENST00000459756 BRWD1Q9NSI6 2320 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-203ENST00000459756 BMP1P13497 986 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-203ENST00000459756 LAG3P18627 525 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 ARL2P36404 184 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 RAB27AP51159 221 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 POU5F1BQ06416 359 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 PTGDRQ13258 359 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 PDIA5Q14554 519 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 PCBP1Q15365 356 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL7A1-203ENST00000459756 RILPL1Q5EBL4 403 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 CLLU1OSQ5K130 101 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 RSPH1Q8WYR4 309 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 UBE2ZQ9H832 354 aaPredicted RBP17.93■□□□□ 0.46
COL7A1-203ENST00000459756 MINDY3Q9H8M7 445 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 PCDHB6Q9Y5E3 794 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 STK24Q9Y6E0 443 aa17.93■□□□□ 0.46
COL7A1-203ENST00000459756 ATG2AQ2TAZ0 1938 aa17.92■□□□□ 0.46
COL7A1-203ENST00000459756 A0A087WWV3 80 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms