RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 RBM41Q96IZ5 413 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 RWDD4Q6NW29 188 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 CEP120Q8N960 986 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 MTRQ99707 1265 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 ACAD9Q9H845 621 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 SUGT1Q9Y2Z0 365 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 HMGCS2P54868 508 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 IQCB1Q15051 598 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 RAB44Q7Z6P3 723 aaPredicted RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 ZNF564Q8TBZ8 553 aaPredicted RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 CHP1Q99653 195 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 INPP5FQ9Y2H2 1132 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 NDUFB10O96000 172 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 PLS3P13797 630 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 STX1BP61266 288 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 TMTC4Q5T4D3 741 aa12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 BZW1Q7L1Q6 419 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
SMARCAD1-204ENST00000457823 FLT1P17948 1338 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 BNIP3LO60238 219 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 EYA4O95677 639 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 THOC1Q96FV9 657 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 WDR24Q96S15 920 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 A0A0G2JLW4 131 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 HUS1O60921 280 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 KRT37O76014 449 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 MYL3P08590 195 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 KRT3P12035 628 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 EPHB1P54762 984 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 STK4Q13043 487 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 SLC12A1Q13621 1099 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 PPWD1Q96BP3 646 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 POLR3FQ9H1D9 316 aaPredicted RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 CACYBPQ9HB71 228 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 EPB41L4AQ9HCS5 686 aaPredicted RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 CALB1P05937 261 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 FBXL13Q8NEE6 735 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 UBE4BO95155 1302 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 IQANK1A0A1B0GTG1 560 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 VGLL3A8MV65 326 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 GOLGA8MH3BSY2 632 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 RPSAP08865 295 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 ARL4CP56559 192 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 ZNF449Q6P9G9 518 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 CRAMP1Q96RY5 1269 aa12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
SMARCAD1-204ENST00000457823 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 S100BP04271 92 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ANXA13P27216 316 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 CASP2P42575 452 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 GPC3P51654 580 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 TNFAIP2Q03169 654 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 DMTNQ08495 405 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ADSSL1Q8N142 457 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 LRGUKQ96M69 825 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 PITPNM3Q9BZ71 974 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 RPAP3Q9H6T3 665 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 RASA4BC9J798 803 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 PDXKO00764 312 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 RASA4O43374 803 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 FDX1P10109 184 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 PMLP29590 882 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 GNA15P30679 374 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ELF1P32519 619 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 PDIA6Q15084 440 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 LMBRD2Q68DH5 695 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 SRRM1Q8IYB3 904 aaKnown RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ASNSD1Q9NWL6 643 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 AGO2Q9UKV8 859 aaKnown RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 SDC4P31431 198 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 GGCXP38435 758 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 EN1Q05925 392 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms