RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NT5DC3Q86UY8 548 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CATSPER3Q86XQ3 398 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 COL23A1Q86Y22 540 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 JAMLQ86YT9 394 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GLYCTKQ8IVS8 523 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PARP9Q8IXQ6 854 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM178BQ8IXR5 827 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SP8Q8IXZ3 490 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC13Q8IYE1 715 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC105Q8IYK2 499 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GBP7Q8N8V2 638 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 BBOF1Q8ND07 529 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GLIS3Q8NEA6 775 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC35G2Q8TBE7 412 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PIK3R5Q8WYR1 880 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEC14L1Q92503 715 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 KIFAP3Q92845 792 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TATDN2Q93075 761 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GJA10Q969M2 543 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MKL1Q969V6 931 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC35C1Q96A29 364 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAGOHBQ96A72 148 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 HVCN1Q96D96 273 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRIM11Q96F44 468 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PGM2Q96G03 612 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GMCL1Q96IK5 515 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 NGLY1Q96IV0 654 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SEC16BQ96JE7 1060 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 IFT74Q96LB3 600 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GPR101Q96P66 508 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ACCSQ96QU6 501 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 XPO6Q96QU8 1125 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 RPS6KC1Q96S38 1066 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 AGPAT1Q99943 283 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 EIF2AK1Q9BQI3 630 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC77Q9BR77 488 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ERP44Q9BS26 406 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TIPINQ9BVW5 301 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TEKT3Q9BXF9 490 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ROPN1BQ9BZX4 212 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TRIM31Q9BZY9 425 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 WNT8AQ9H1J5 351 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PABPC3Q9H361 631 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 KDM4CQ9H3R0 1056 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ROPN1Q9HAT0 212 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SIX2Q9NPC8 291 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 A1CFQ9NQ94 594 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 KLC4Q9NSK0 619 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 INTS9Q9NV88 658 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 PI4KBQ9UBF8 816 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 APEX2Q9UBZ4 518 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 CNOT7Q9UIV1 285 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 EXOC7Q9UPT5 735 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 STXBP5LQ9Y2K9 1186 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ATP8A1Q9Y2Q0 1164 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 MRPL11Q9Y3B7 192 aaKnown RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 LRRC37AA6NMS7 1700 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 ASTN1O14525 1302 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 FRMPD4Q14CM0 1322 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 TAF1LQ8IZX4 1826 aa3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 GREB1LQ9C091 1923 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P18-201ENST00000457642 LY75O60449 1722 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TLDC2A0PJX2 215 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMEM110-MUSTN1A8MSY1 372 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 BHMG1C9JSJ3 638 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 H0YGN5 161 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 PIK3CDO00329 1044 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MEIS1O00470 390 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX3XO00571 662 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MEIS2O14770 477 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RASGRF2O14827 1237 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NKRFO15226 690 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAPK13O15264 365 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MSH4O15457 936 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX3YO15523 660 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ASAP2O43150 1006 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CHMP2AO43633 222 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 BUB1BO60566 1050 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 TOM1O60784 492 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 RTN2O75298 545 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NPM3O75607 178 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SUN1O94901 812 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 GAS8O95995 478 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NDUFB10O96000 172 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MMEP08473 750 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 VIMP08670 466 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 SPATA31C1P0DKV0 1188 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYBL1P10243 752 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAPTP10636 758 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 EEF2P13639 858 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NPR1P16066 1061 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CTNNA2P26232 953 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ECHS1P30084 290 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 NMT1P30419 496 aaKnown RBP3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ALDH1B1P30837 517 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 ABCD1P33897 745 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 CRKP46108 304 aa3.59□□□□□ -1.83
HMGN1P18-201ENST00000457642 MMP14P50281 582 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms