RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ANKEF1Q9NU02 776 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 RIPK3Q9Y572 518 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 DDX3XO00571 662 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC43-202ENST00000457422 BACH1O14867 736 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 CCNE2O96020 404 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 OAZ1P54368 228 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 MYL7Q01449 175 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 DNAAF5Q86Y56 855 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 ZNF280CQ8ND82 737 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 SLC30A5Q8TAD4 765 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-202ENST00000457422 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
CCDC43-202ENST00000457422 GPR88Q9GZN0 384 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 MTFR1LQ9H019 292 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 DNAJC12Q9UKB3 198 aa18.16■□□□□ 0.5
CCDC43-202ENST00000457422 TISP43B9A030 160 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 P4HA2O15460 535 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 KRT13P13646 458 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 TNFRSF8P28908 595 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC43-202ENST00000457422 NCKAP1LP55160 1127 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 MCCD1P59942 119 aaPredicted RBP18.15■□□□□ 0.5
CCDC43-202ENST00000457422 BAATQ14032 418 aaPredicted RBP18.15■□□□□ 0.5
CCDC43-202ENST00000457422 DRAP1Q14919 205 aaPredicted RBP18.15■□□□□ 0.5
CCDC43-202ENST00000457422 LRRC57Q8N9N7 239 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 GPRASP2Q96D09 838 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
CCDC43-202ENST00000457422 WRNIP1Q96S55 665 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 SYT11Q9BT88 431 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 MED4Q9NPJ6 270 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 ZNF541Q9H0D2 1346 aa18.15■□□□□ 0.5
CCDC43-202ENST00000457422 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 MAFGO15525 162 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 N4BP1O75113 896 aaKnown RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 H2AFZP0C0S5 128 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 CCDC172P0C7W6 258 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 MYBL2P10244 700 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 PTPRAP18433 802 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 CYP2C19P33261 490 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 MATR3P43243 847 aaKnown RBP eCLIP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 DNA2P51530 1060 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 PRAMEF18Q5VWM3 479 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 ZNF746Q6NUN9 644 aaPredicted RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 H2AFVQ71UI9 128 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 GSPT2Q8IYD1 628 aaKnown RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 RDH13Q8NBN7 331 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 LMO3Q8TAP4 145 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 AENQ8WTP8 325 aaKnown RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 MS4A14Q96JA4 679 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 PCIF1Q9H4Z3 704 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 PICK1Q9NRD5 415 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 RBM12Q9NTZ6 932 aaKnown RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.5
CCDC43-202ENST00000457422 ADAMTS5Q9UNA0 930 aa18.14■□□□□ 0.5
CCDC43-202ENST00000457422 KIAA1217Q5T5P2 1943 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 LMNB1P20700 586 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 CCND2P30279 289 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 NPEPPSP55786 919 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 PLA2G4FQ68DD2 849 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 HAUS6Q7Z4H7 955 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 FAM71BQ8TC56 605 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 ZBTB9Q96C00 473 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 GPRC5CQ9NQ84 441 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.14■□□□□ 0.49
CCDC43-202ENST00000457422 STIM2Q9P246 746 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 TCEAL9Q9UHQ7 104 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 PACSIN2Q9UNF0 486 aaPredicted RBP18.14■□□□□ 0.49
CCDC43-202ENST00000457422 ARID2Q68CP9 1835 aa18.14■□□□□ 0.49
CCDC43-202ENST00000457422 DSG3P32926 999 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 TNNT3P45378 269 aaPredicted RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 TRMT1LQ7Z2T5 733 aaKnown RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 SLFN11Q7Z7L1 901 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 XXYLT1Q8NBI6 393 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 TPCN2Q8NHX9 752 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 LNX1Q8TBB1 728 aaPredicted RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 HDAC7Q8WUI4 952 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 VTI1AQ96AJ9 217 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 SELENOOQ9BVL4 669 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 MAF1Q9H063 256 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 HPCAL4Q9UM19 191 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 LOC285556D6RIA3 1793 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 PMM2O15305 246 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 KIF4AO95239 1232 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 VAMP7P51809 220 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 HMGCS2P54868 508 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 ANGEL2Q5VTE6 544 aaKnown RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 C8orf74Q6P047 294 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 APOBEC3FQ8IUX4 373 aaKnown RBP18.13■□□□□ 0.49
CCDC43-202ENST00000457422 HVCN1Q96D96 273 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 CBWD1Q9BRT8 395 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 HSPBP1Q9NZL4 362 aa18.13■□□□□ 0.49
CCDC43-202ENST00000457422 C19orf81C9J6K1 198 aa18.12■□□□□ 0.49
CCDC43-202ENST00000457422 ATP2A1O14983 1001 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms