RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 GANQ9H2C0 597 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 KCNH7Q9NS40 1196 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
LINC00959-201ENST00000456581 CTNND1O60716 968 aaKnown RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 HMGCS2P54868 508 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 MRPS9P82933 396 aaKnown RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 UAP1Q16222 522 aaPredicted RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 ASIC2Q16515 512 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 ALS2CLQ60I27 953 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 NSMFQ6X4W1 530 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 PLA2G6O60733 806 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 FNTAP49354 379 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 HSD17B4P51659 736 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 IFT88Q13099 833 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 SLC38A10Q9HBR0 1119 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 CNOT8Q9UFF9 292 aaKnown RBP13.51□□□□□ -0.25
LINC00959-201ENST00000456581 AMACRQ9UHK6 382 aa13.51□□□□□ -0.25
LINC00959-201ENST00000456581 GCNT3O95395 438 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 EYA4O95677 639 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 CPP00450 1065 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 EPB41P11171 864 aaKnown RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 MNAT1P51948 309 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 PAK2Q13177 524 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 PLS1Q14651 629 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 RNF187Q5TA31 235 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 ZHX2Q9Y6X8 837 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 PITPNM2Q9BZ72 1349 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 RPS12P25398 132 aaKnown RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 HSD17B3P37058 310 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 ITGB3BPQ13352 177 aaPredicted RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 PPP2R5CQ13362 524 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 COG2Q14746 738 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 RNF10Q8N5U6 811 aaKnown RBP13.5□□□□□ -0.25
LINC00959-201ENST00000456581 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 LXNQ9BS40 222 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
LINC00959-201ENST00000456581 E7EVH7 732 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 SORBS3O60504 671 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 IRX3P78415 501 aaPredicted RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 SKOR1P84550 965 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 C1orf186Q6ZWK4 172 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 SPAG5Q96R06 1193 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 OSGEPQ9NPF4 335 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 PPP1R9AQ9ULJ8 1098 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 TELO2Q9Y4R8 837 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 DAPK3O43293 454 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 ATP9AO75110 1047 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 UCHL3P15374 230 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 METTL13Q8N6R0 699 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 ZNF473Q8WTR7 871 aaKnown RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 CCT8L2Q96SF2 557 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 CHORDC1Q9UHD1 332 aaPredicted RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 CENPFP49454 3210 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 AKAP3O75969 853 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 PTPRAP18433 802 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 DPY19L2P1Q6NXN4 242 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 ARHGAP27Q6ZUM4 889 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 EPM2AIP1Q7L775 607 aaPredicted RBP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 LPAR1Q92633 364 aa13.49□□□□□ -0.25
LINC00959-201ENST00000456581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00959-201ENST00000456581 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 KIF4AO95239 1232 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TRAF1Q13077 416 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 PTGISQ16647 500 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TKFCQ3LXA3 575 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 ATP6V1G3Q96LB4 118 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 JPH2Q9BR39 696 aaPredicted RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 ASTN1O14525 1302 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 VWA5AO00534 786 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 TTI1O43156 1089 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 SART1O43290 800 aaKnown RBP13.48□□□□□ -0.25
LINC00959-201ENST00000456581 FAM13AO94988 1023 aa13.48□□□□□ -0.25
LINC00959-201ENST00000456581 PON1P27169 355 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms