RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 LONRF3Q496Y0 759 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 CATSPER4Q7RTX7 472 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 RNF149Q8NC42 400 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 TCP11Q8WWU5 503 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 NACC1Q96RE7 527 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 POLD4Q9HCU8 107 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 HCSTQ9UBK5 93 aa27.69■■■□□ 2.02
MSH2-203ENST00000454849 COL4A6Q14031 1691 aa27.68■■■□□ 2.02
MSH2-203ENST00000454849 LINC00271P0C7V0 271 aa27.68■■■□□ 2.02
MSH2-203ENST00000454849 GPM6BQ13491 265 aa27.68■■■□□ 2.02
MSH2-203ENST00000454849 DTHD1Q6ZMT9 781 aa27.68■■■□□ 2.02
MSH2-203ENST00000454849 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.68■■■□□ 2.02
MSH2-203ENST00000454849 KIAA1024Q9UPX6 916 aa27.68■■■□□ 2.02
MSH2-203ENST00000454849 ARID2Q68CP9 1835 aa27.67■■■□□ 2.02
MSH2-203ENST00000454849 DGAT1O75907 488 aa27.67■■■□□ 2.02
MSH2-203ENST00000454849 SFPQP23246 707 aaKnown RBP eCLIP27.67■■■□□ 2.02
MSH2-203ENST00000454849 SKIV2LQ15477 1246 aaKnown RBP27.67■■■□□ 2.02
MSH2-203ENST00000454849 ZRSR1Q15695 479 aaKnown RBP27.67■■■□□ 2.02
MSH2-203ENST00000454849 ECHDC2Q86YB7 292 aa27.67■■■□□ 2.02
MSH2-203ENST00000454849 IGSF22Q8N9C0 903 aa27.67■■■□□ 2.02
MSH2-203ENST00000454849 SNX29Q8TEQ0 813 aa27.67■■■□□ 2.02
MSH2-203ENST00000454849 POLR3FQ9H1D9 316 aaPredicted RBP27.67■■■□□ 2.02
MSH2-203ENST00000454849 PIN4Q9Y237 131 aaKnown RBP27.67■■■□□ 2.02
MSH2-203ENST00000454849 COL4A4P53420 1690 aaPredicted RBP27.67■■■□□ 2.02
MSH2-203ENST00000454849 XRCC6P12956 609 aaKnown RBP eCLIP27.66■■■□□ 2.02
MSH2-203ENST00000454849 BMPR1AP36894 532 aa27.66■■■□□ 2.02
MSH2-203ENST00000454849 PDIA5Q14554 519 aa27.66■■■□□ 2.02
MSH2-203ENST00000454849 CMTR2Q8IYT2 770 aaKnown RBP27.66■■■□□ 2.02
MSH2-203ENST00000454849 INO80BQ9C086 356 aaPredicted RBP27.66■■■□□ 2.02
MSH2-203ENST00000454849 DDX19AQ9NUU7 478 aaKnown RBP27.66■■■□□ 2.02
MSH2-203ENST00000454849 TMEM161AQ9NX61 479 aa27.66■■■□□ 2.02
MSH2-203ENST00000454849 ARHGEF35A5YM69 484 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 VWA3AA6NCI4 1184 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 GAS2O43903 313 aaKnown RBP27.65■■■□□ 2.02
MSH2-203ENST00000454849 SYT1P21579 422 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 ARL2P36404 184 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 ATP2C1P98194 919 aaPredicted RBP27.65■■■□□ 2.02
MSH2-203ENST00000454849 HAUS3Q68CZ6 603 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 TWF2Q6IBS0 349 aaKnown RBP27.65■■■□□ 2.02
MSH2-203ENST00000454849 PLIN2Q99541 437 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 RNF19AQ9NV58 838 aa27.65■■■□□ 2.02
MSH2-203ENST00000454849 DBR1Q9UK59 544 aaKnown RBP27.65■■■□□ 2.02
MSH2-203ENST00000454849 LAD1O00515 517 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 ASAP2O43150 1006 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 POU3F3P20264 500 aaPredicted RBP27.64■■■□□ 2.02
MSH2-203ENST00000454849 GLRA2P23416 452 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 PRPHP41219 470 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 CAPSQ13938 189 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 SPOUT1Q5T280 376 aaKnown RBP27.64■■■□□ 2.02
MSH2-203ENST00000454849 FAM173BQ6P4H8 233 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 PADI6Q6TGC4 694 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 SAMD11Q96NU1 681 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 RAB34Q9BZG1 259 aa27.64■■■□□ 2.02
MSH2-203ENST00000454849 H3BNC9 293 aa27.63■■■□□ 2.01
MSH2-203ENST00000454849 PDCP20941 246 aa27.63■■■□□ 2.01
MSH2-203ENST00000454849 SRGAP1Q7Z6B7 1085 aa27.63■■■□□ 2.01
MSH2-203ENST00000454849 CLP1Q92989 425 aaKnown RBP27.63■■■□□ 2.01
MSH2-203ENST00000454849 LPPQ93052 612 aa27.63■■■□□ 2.01
MSH2-203ENST00000454849 MMTAG2Q9BU76 263 aaKnown RBP27.63■■■□□ 2.01
MSH2-203ENST00000454849 BHMT2Q9H2M3 363 aa27.63■■■□□ 2.01
MSH2-203ENST00000454849 ALG13Q9NP73 1137 aaKnown RBP27.63■■■□□ 2.01
MSH2-203ENST00000454849 A0A0U1RQF3 1178 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 E9PMD0 336 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 GRM6O15303 877 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 ATF7P17544 494 aaPredicted RBP27.62■■■□□ 2.01
MSH2-203ENST00000454849 PHKA2P46019 1235 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 MXD4Q14582 209 aaPredicted RBP27.62■■■□□ 2.01
MSH2-203ENST00000454849 KRT79Q5XKE5 535 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 INTS4Q96HW7 963 aaKnown RBP27.62■■■□□ 2.01
MSH2-203ENST00000454849 ELAC1Q9H777 363 aaKnown RBP27.62■■■□□ 2.01
MSH2-203ENST00000454849 TYW1Q9NV66 732 aaKnown RBP27.62■■■□□ 2.01
MSH2-203ENST00000454849 DACT1Q9NYF0 836 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 A0A0C4DFX4 3053 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 REV3LO60673 3130 aa27.62■■■□□ 2.01
MSH2-203ENST00000454849 INO80B-WBP1J3KQ70 363 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 PTENP60484 403 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 TFDP1Q14186 410 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 CLLU1OSQ5K130 101 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 KCNK18Q7Z418 384 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 BRAPQ7Z569 592 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 SPRYD3Q8NCJ5 442 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 HELQQ8TDG4 1101 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 SNX21Q969T3 373 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 CPB2Q96IY4 423 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 CASD1Q96PB1 797 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 CHST12Q9NRB3 414 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 NLRC5Q86WI3 1866 aa27.61■■■□□ 2.01
MSH2-203ENST00000454849 UNC80Q8N2C7 3258 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 LRRIQ4A6NIV6 560 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 MEIS3P2A8K0S8 358 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 HOXA11P31270 313 aaPredicted RBP27.6■■■□□ 2.01
MSH2-203ENST00000454849 LRRC55Q6ZSA7 311 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 ZNF598Q86UK7 904 aaKnown RBP27.6■■■□□ 2.01
MSH2-203ENST00000454849 HSCBQ8IWL3 235 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 BSNDQ8WZ55 320 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 AGPAT5Q9NUQ2 364 aa27.6■■■□□ 2.01
MSH2-203ENST00000454849 MYO7AQ13402 2215 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 CYP11B2P19099 503 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 RESTQ13127 1097 aa27.59■■■□□ 2.01
MSH2-203ENST00000454849 SF3A1Q15459 793 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms