RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MXD4Q14582 209 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SLC39A14Q15043 492 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 PPP2R2DQ66LE6 453 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 PADI6Q6TGC4 694 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SRGAP1Q7Z6B7 1085 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 NPAS4Q8IUM7 802 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 LRRC15Q8TF66 581 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 ZNF689Q96CS4 500 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SCLT1Q96NL6 688 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 NT5C3AQ9H0P0 336 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 POLR3FQ9H1D9 316 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 BHMT2Q9H2M3 363 aa15.75■□□□□ 0.11
HDAC4-205ENST00000454542 SRPRBQ9Y5M8 271 aaKnown RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 FNDC1Q4ZHG4 1894 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-205ENST00000454542 LINC01553A4QN01 128 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 E9PMD0 336 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 BRD1O95696 1058 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 LINC00271P0C7V0 271 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 FAM189BP81408 668 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 PCBP1Q15365 356 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDAC4-205ENST00000454542 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-205ENST00000454542 CABP7Q86V35 215 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 ADAM2Q99965 735 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 TRAIPQ9BWF2 469 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 INO80BQ9C086 356 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-205ENST00000454542 CCSER1Q9C0I3 900 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 MINDY3Q9H8M7 445 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 SLC28A3Q9HAS3 691 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 GPRC5CQ9NQ84 441 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 AGPAT5Q9NUQ2 364 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 INSL6Q9Y581 213 aa15.74■□□□□ 0.11
HDAC4-205ENST00000454542 ADGRA3Q8IWK6 1321 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 CSDE1O75534 798 aaKnown RBP15.73■□□□□ 0.11
HDAC4-205ENST00000454542 DGKIO75912 1065 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 YEATS4O95619 227 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 FGFR4P22455 802 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 PHKA2P46019 1235 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 GRIN2CQ14957 1233 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 FAM117BQ6P1L5 589 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 SLC24A5Q71RS6 500 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 ELAC1Q9H777 363 aaKnown RBP15.73■□□□□ 0.11
HDAC4-205ENST00000454542 CHST12Q9NRB3 414 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
HDAC4-205ENST00000454542 DENND3A2RUS2 1198 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 ATF7P17544 494 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-205ENST00000454542 MARCKSP29966 332 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-205ENST00000454542 SLC12A3P55017 1021 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 MBTD1Q05BQ5 628 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 MAPK7Q13164 816 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 TFDP1Q14186 410 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 BECN1Q14457 450 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 AMHR2Q16671 573 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 C1orf186Q6ZWK4 172 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 ZNF598Q86UK7 904 aaKnown RBP15.72■□□□□ 0.11
HDAC4-205ENST00000454542 DAW1Q8N136 415 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 SYT2Q8N9I0 419 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-205ENST00000454542 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 BSNDQ8WZ55 320 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 FAM161BQ96MY7 647 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 YME1L1Q96TA2 773 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 ZBED2Q9BTP6 218 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 RUSC1Q9BVN2 902 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 BLOC1S4Q9NUP1 217 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 TMEM161AQ9NX61 479 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 ZDHHC9Q9Y397 364 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 TRANK1O15050 2925 aa15.72■□□□□ 0.11
HDAC4-205ENST00000454542 PPP6R2O75170 966 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 UPP2O95045 317 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 STAG3L1P0CL83 205 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 SRGAP2CP0DJJ0 459 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 GUCY2CP25092 1073 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 UBA7P41226 1012 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 ERVK-21P61565 698 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 ATL3Q6DD88 541 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 CATSPER4Q7RTX7 472 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 CMTR2Q8IYT2 770 aaKnown RBP15.71■□□□□ 0.11
HDAC4-205ENST00000454542 KRI1Q8N9T8 703 aaKnown RBP15.71■□□□□ 0.11
HDAC4-205ENST00000454542 KIFAP3Q92845 792 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 ZNF396Q96N95 335 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-205ENST00000454542 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
HDAC4-205ENST00000454542 TIPINQ9BVW5 301 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 KCND2Q9NZV8 630 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
HDAC4-205ENST00000454542 A0A0U1RQF3 1178 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 EPOPA6NHQ4 379 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 TSPAN1O60635 241 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 ZSCAN20P17040 1043 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 PLCG1P19174 1290 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 DDIT3P35638 169 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 NAMPTP43490 491 aa15.7■□□□□ 0.1
HDAC4-205ENST00000454542 CEBPZQ03701 1054 aaKnown RBP15.7■□□□□ 0.1
HDAC4-205ENST00000454542 KARSQ15046 597 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms