RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FERP16591 822 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SEMA3FQ13275 785 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 NAB2Q15742 525 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 FAM71BQ8TC56 605 aa12.99□□□□□ -0.33
SMPD4-213ENST00000454468 POLR3CQ9BUI4 534 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 TOPORSQ9NS56 1045 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-213ENST00000454468 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 PSMD10O75832 226 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 CCDC50Q8IVM0 306 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 BTBD6Q96KE9 485 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 ACCSQ96QU6 501 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 TUFT1Q9NNX1 390 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 HACL1Q9UJ83 578 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 CYP3A7-CYP3A51PA0A087WV96 503 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 GRID2IPA4D2P6 1211 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 CYP26A1O43174 497 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 CYP3A7P24462 503 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 HOXD13P35453 343 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 VAMP7P51809 220 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 OSTNP61366 133 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 PAK2Q13177 524 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 TKFCQ3LXA3 575 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
SMPD4-213ENST00000454468 HPCAL4Q9UM19 191 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 GINS2Q9Y248 185 aa12.98□□□□□ -0.33
SMPD4-213ENST00000454468 FTLP02792 175 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-213ENST00000454468 CYP2C19P33261 490 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 GNGT1P63211 74 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 C1orf186Q6ZWK4 172 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 PASD1Q8IV76 773 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 TAS2R14Q9NYV8 317 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 RAB21Q9UL25 225 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 IGLV3-22A0A075B6J6 115 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 RAD51CO43502 376 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 ITGA4P13612 1032 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 SOX5P35711 763 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 SNX1Q13596 522 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
SMPD4-213ENST00000454468 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 WNK4Q96J92 1243 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 PCDHA2Q9Y5H9 948 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 SMCHD1A6NHR9 2005 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 OPA1O60313 960 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 ERLIN2O94905 339 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 KIF4AO95239 1232 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 VCAM1P19320 739 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 FECHP22830 423 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 NOVP48745 357 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 BFSP1Q12934 665 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 ZNF394Q53GI3 561 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 RNF10Q8N5U6 811 aaKnown RBP12.97□□□□□ -0.33
SMPD4-213ENST00000454468 TMEM143Q96AN5 459 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 THAP2Q9H0W7 228 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 ZNF408Q9H9D4 720 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
SMPD4-213ENST00000454468 BZW2Q9Y6E2 419 aaKnown RBP12.97□□□□□ -0.33
SMPD4-213ENST00000454468 GOLGA6L10A0A0M3HER8 536 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 GADL1Q6ZQY3 521 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 IFT74Q96LB3 600 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 GANQ9H2C0 597 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 RIPK3Q9Y572 518 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 PGRMC1O00264 195 aaKnown RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 DAPK3O43293 454 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 ICAM1P05362 532 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 ACOT2P49753 483 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 LIG4P49917 911 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 CDR1P51861 262 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 PDCLQ13371 301 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 TRIP13Q15645 432 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 UGCGQ16739 394 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 TAB3Q8N5C8 712 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-213ENST00000454468 METTL13Q8N6R0 699 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 TRIM51Q9BSJ1 452 aa12.96□□□□□ -0.33
SMPD4-213ENST00000454468 ATP8A1Q9Y2Q0 1164 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms