RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 KIAA0319LQ8IZA0 1049 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 LRRC71Q8N4P6 559 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
VCX3B-204ENST00000453306 DHX58Q96C10 678 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 C1QTNF1Q9BXJ1 281 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 KDM3AQ9Y4C1 1321 aa17.42■□□□□ 0.38
VCX3B-204ENST00000453306 COL1A2P08123 1366 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 RSPH10B2B2RC85 870 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 ACTN4O43707 911 aaKnown RBP17.41■□□□□ 0.38
VCX3B-204ENST00000453306 AMHP03971 560 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 RSPH10BP0C881 870 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 GNAT1P11488 350 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 THPOP40225 353 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 MAPK7Q13164 816 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 RINT1Q6NUQ1 792 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 TRAF7Q6Q0C0 670 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 PADI6Q6TGC4 694 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 OTUD6AQ7L8S5 288 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 FMR1NBQ8N0W7 255 aaPredicted RBP17.41■□□□□ 0.38
VCX3B-204ENST00000453306 DAW1Q8N136 415 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
VCX3B-204ENST00000453306 STAMQ92783 540 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 NT5C3AQ9H0P0 336 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 GPRC5CQ9NQ84 441 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 SERTAD1Q9UHV2 236 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 TUBE1Q9UJT0 475 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 INSL6Q9Y581 213 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 XIRP2A4UGR9 3374 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 TCHHQ07283 1943 aa17.41■□□□□ 0.38
VCX3B-204ENST00000453306 LCHNA4D1U4 455 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CAND2O75155 1236 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CYP11B2P19099 503 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CASP1P29466 404 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CLCN3P51790 818 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 ERVK-21P61565 698 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 DHX8Q14562 1220 aaKnown RBP17.4■□□□□ 0.38
VCX3B-204ENST00000453306 EFCAB12Q6NXP0 572 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 TMCO2Q7Z6W1 182 aaPredicted RBP17.4■□□□□ 0.38
VCX3B-204ENST00000453306 GRAMD1CQ8IYS0 662 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 DNAJB3Q8WWF6 145 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 TMEM143Q96AN5 459 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 CCDC39Q9UFE4 941 aa17.4■□□□□ 0.38
VCX3B-204ENST00000453306 TRIP12Q14669 1992 aaPredicted RBP17.4■□□□□ 0.38
VCX3B-204ENST00000453306 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 MYMKA6NI61 221 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 LPXNO60711 386 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
VCX3B-204ENST00000453306 STAT6P42226 847 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 TBC1D8BQ0IIM8 1120 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 EMC2Q15006 297 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 KCTD17Q8N5Z5 321 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 GDPD5Q8WTR4 605 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
VCX3B-204ENST00000453306 NECAB3Q96P71 396 aaPredicted RBP17.39■□□□□ 0.37
VCX3B-204ENST00000453306 SUGCTQ9HAC7 445 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 KBTBD4Q9NVX7 518 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 RAPGEFL1Q9UHV5 662 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 TRANK1O15050 2925 aa17.39■□□□□ 0.37
VCX3B-204ENST00000453306 TET1Q8NFU7 2136 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 SMIM35A0A1B0GVV1 85 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 NR1I2O75469 434 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 ZNF202O95125 648 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 SSBP05455 408 aaKnown RBP eCLIP17.38■□□□□ 0.37
VCX3B-204ENST00000453306 ARL2P36404 184 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 TXLNAP40222 546 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 SYKP43405 635 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 CACNB1Q02641 598 aaPredicted RBP17.38■□□□□ 0.37
VCX3B-204ENST00000453306 FAM117BQ6P1L5 589 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 KSR1Q8IVT5 923 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 DBF4BQ8NFT6 615 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 ASAP3Q8TDY4 903 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 BSNDQ8WZ55 320 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 SEPT8Q92599 483 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 ZNF668Q96K58 619 aaPredicted RBP17.38■□□□□ 0.37
VCX3B-204ENST00000453306 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
VCX3B-204ENST00000453306 MTUS1Q9ULD2 1270 aa17.38■□□□□ 0.37
VCX3B-204ENST00000453306 SFI1A8K8P3 1242 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 MAGEB2O15479 319 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 DGAT1O75907 488 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 CHRNA1P02708 482 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 VTNP04004 478 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 SLFN14P0C7P3 912 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 MCM4P33991 863 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 RFC5P40937 340 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 UBE2HP62256 183 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 RAD51AP2Q09MP3 1159 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 GIT2Q14161 759 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 MBTPS1Q14703 1052 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 TCTN1Q2MV58 587 aa17.37■□□□□ 0.37
VCX3B-204ENST00000453306 PLEKHG4Q58EX7 1191 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms