RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 JAKMIP3Q5VZ66 844 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ADALQ6DHV7 355 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 PPFIBP1Q86W92 1011 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ERC1Q8IUD2 1116 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 SUGP1Q8IWZ8 645 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 FBXL16Q8N461 479 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 FIBCD1Q8N539 461 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 NSUN7Q8NE18 718 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 DDX1Q92499 740 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 FERD3LQ96RJ6 166 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 USP28Q96RU2 1077 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 CARD6Q9BX69 1037 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 NAT10Q9H0A0 1025 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 NOL6Q9H6R4 1146 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 BCAS3Q9H6U6 928 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZCCHC17Q9NP64 241 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 CWC15Q9P013 229 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 TUBE1Q9UJT0 475 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ADAM21Q9UKJ8 722 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 ZNRF3Q9ULT6 936 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 DIS3Q9Y2L1 958 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 RRP15Q9Y3B9 282 aaKnown RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 METP08581 1390 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 COL15A1P39059 1388 aa4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P22-202ENST00000451823 LMTK3Q96Q04 1460 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 FLT4P35916 1363 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 TMEM94Q12767 1356 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 HEG1Q9ULI3 1381 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A0D9SFI3 127 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A1B0GUL7 405 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 GOLGA6L9A6NEM1 432 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 BECN2A8MW95 431 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 POLR3GO15318 223 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 SRGAP3O43295 1099 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 PPP1R11O60927 126 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CLSTN1O94985 981 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 IVLP07476 585 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CD3EP07766 207 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 NBPF7P0C2Y1 421 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 IMPDH2P12268 514 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 IFNGR1P15260 489 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 L1CAMP32004 1257 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 MC3RP41968 323 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 EVCP57679 992 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CORO7P57737 925 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 EXOSC10Q01780 885 aaKnown RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 SCRN1Q12765 414 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 TCEAL1Q15170 157 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 TAF7Q15545 349 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 LONRF2Q1L5Z9 754 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 DPCR1Q3MIW9 517 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 VWA3BQ502W6 1294 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 BEND6Q5SZJ8 279 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 UBXN11Q5T124 520 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZFYVE27Q5T4F4 411 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CCDC73Q6ZRK6 1079 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 VSTM4Q8IW00 320 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 ELOA2Q8IYF1 753 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CLASRPQ8N2M8 674 aaKnown RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 CCDC191Q8NCU4 936 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 IL17REQ8NFR9 667 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 MRPS27Q92552 414 aaKnown RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 FAM227BQ96M60 508 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF396Q96N95 335 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 TM9SF2Q99805 663 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 NCAPGQ9BPX3 1015 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 SPATA25Q9BR10 227 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 PARD6BQ9BYG5 372 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 USP40Q9NVE5 1235 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 IFNKQ9P0W0 207 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 PCDHA7Q9UN72 937 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 L1RE1Q9UN81 338 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 PMF1-BGLAPU3KQ54 211 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 ANKARQ7Z5J8 1434 aa4.71□□□□□ -1.66
HMGB3P22-202ENST00000451823 DIP2BQ9P265 1576 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 CARMIL3Q8ND23 1372 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A087WWV3 80 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 A0A087WZG4 1122 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 NPHP1O15259 732 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ARHGAP6O43182 974 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZSCAN12O43309 604 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 KINO60870 393 aaKnown RBP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 YEATS4O95619 227 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ASGR2P07307 311 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ATP2B1P20020 1258 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 EIF4A1P60842 406 aaKnown RBP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 TUBB4BP68371 445 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 FANCCQ00597 558 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 TUBB2AQ13885 445 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 NBPF6Q5VWK0 638 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 CYP2R1Q6VVX0 501 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 ZNF589Q86UQ0 364 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 FSIP1Q8NA03 581 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 LINC00301Q8NCQ3 95 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 DPF2Q92785 391 aa4.7□□□□□ -1.66
HMGB3P22-202ENST00000451823 SMARCC1Q92922 1105 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms