RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 THNSL1Q8IYQ7 743 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 ABI1Q8IZP0 508 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 FBXO18Q8NFZ0 1043 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 PIGOQ8TEQ8 1089 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 LPPQ93052 612 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 JPH2Q9BR39 696 aaPredicted RBP10.81□□□□□ -0.68
USP54-207ENST00000451492 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
USP54-207ENST00000451492 TMEM161AQ9NX61 479 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 CLDND1Q9NY35 253 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 COG5Q9UP83 839 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 PCDHGC5Q9Y5F6 944 aa10.81□□□□□ -0.68
USP54-207ENST00000451492 MYH11P35749 1972 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 SLITRK3O94933 977 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 RB1P06400 928 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 DNAJB1P25685 340 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 CA8P35219 290 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP54-207ENST00000451492 RFC5P40937 340 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 ZNF410Q86VK4 478 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 COLGALT1Q8NBJ5 622 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 POF1BQ8WVV4 589 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 PRPF31Q8WWY3 499 aaKnown RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 MTMR9Q96QG7 549 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 TYW1Q9NV66 732 aaKnown RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 NOL7Q9UMY1 257 aaKnown RBP10.8□□□□□ -0.68
USP54-207ENST00000451492 INPP5FQ9Y2H2 1132 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 MUC3AQ02505 3323 aa10.8□□□□□ -0.68
USP54-207ENST00000451492 MED24O75448 989 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 GJB2P29033 226 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 IRS1P35568 1242 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 LAMTOR4Q0VGL1 99 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 CLLU1OSQ5K130 101 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 ADGRD2Q7Z7M1 963 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 RBM23Q86U06 439 aaKnown RBP10.79□□□□□ -0.68
USP54-207ENST00000451492 RNF149Q8NC42 400 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 NEK9Q8TD19 979 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 P2RX5Q93086 422 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 TBC1D32Q96NH3 1257 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 CASD1Q96PB1 797 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 PLVAPQ9BX97 442 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 INO80BQ9C086 356 aaPredicted RBP10.79□□□□□ -0.68
USP54-207ENST00000451492 CWH43Q9H720 699 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 ELAC1Q9H777 363 aaKnown RBP10.79□□□□□ -0.68
USP54-207ENST00000451492 MINDY3Q9H8M7 445 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 XPNPEP1Q9NQW7 623 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 PLAGL2Q9UPG8 496 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 MYH15Q9Y2K3 1946 aa10.79□□□□□ -0.68
USP54-207ENST00000451492 MYO7AQ13402 2215 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 MEIS3P2A8K0S8 358 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 H3BQV1 296 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 TNFRSF10AO00220 468 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 LINC01565O15544 149 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 HOXA2O43364 376 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 ERLIN2O94905 339 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 BMP1P13497 986 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 ATF7P17544 494 aaPredicted RBP10.78□□□□□ -0.68
USP54-207ENST00000451492 PHKA2P46019 1235 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 RARRES1P49788 294 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 CDC42EP1Q00587 391 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 HYAL1Q12794 435 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 LRRC55Q6ZSA7 311 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 LRRC43Q8N309 656 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 ERMNQ8TAM6 284 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 SPPL3Q8TCT6 385 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 ASAP3Q8TDY4 903 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 TCP11Q8WWU5 503 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 CPB2Q96IY4 423 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 LMAN2LQ9H0V9 348 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 POLR3FQ9H1D9 316 aaPredicted RBP10.78□□□□□ -0.68
USP54-207ENST00000451492 IFT122Q9HBG6 1241 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 GPRC5CQ9NQ84 441 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 PCDHB6Q9Y5E3 794 aa10.78□□□□□ -0.68
USP54-207ENST00000451492 BRWD1Q9NSI6 2320 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 NT5C1B-RDH14C9J2C7 533 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 GAS2O43903 313 aaKnown RBP10.77□□□□□ -0.69
USP54-207ENST00000451492 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP54-207ENST00000451492 DGAT1O75907 488 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 FGF18O76093 207 aa10.77□□□□□ -0.69
USP54-207ENST00000451492 IL9P15248 144 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms