RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MKNK1Q9BUB5 465 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 FAM207AQ9NSI2 230 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 HOXC10Q9NYD6 342 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 DDX41Q9UJV9 622 aaKnown RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 CNTNAP2Q9UHC6 1331 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 A0A0U1RQG5 324 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 WDR64B1ANS9 1081 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 MAPK13O15264 365 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ZRANB2O95218 330 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP46-202ENST00000451218 PGK2P07205 417 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 UCHL3P15374 230 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 CYP27A1Q02318 531 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 MYBPC2Q14324 1141 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 HSDL1Q3SXM5 330 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ARHGEF16Q5VV41 709 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 CDCA2Q69YH5 1023 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 SMAP1Q8IYB5 467 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 ANKRD13AQ8IZ07 590 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 UBR7Q8N806 425 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 LRRC57Q8N9N7 239 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ERMNQ8TAM6 284 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ZBTB10Q96DT7 871 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 EDEM3Q9BZQ6 932 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 JPH1Q9HDC5 661 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 COQ4Q9Y3A0 265 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 PROZP22891 400 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 JAK3P52333 1124 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 KRT76Q01546 638 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PRKCEQ02156 737 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 GFPT1Q06210 699 aaPredicted RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 LY6KQ17RY6 165 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 ZBTB41Q5SVQ8 909 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 ARHGEF19Q8IW93 802 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SPIRE2Q8WWL2 714 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 DDX1Q92499 740 aaKnown RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 MFSD14AQ96MC6 490 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PDGFCQ9NRA1 345 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 NLRC5Q86WI3 1866 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 A0A087X0T9 212 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 FAM155AB1AL88 458 aaPredicted RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 ATP1A1P05023 1023 aaKnown RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 FAM228BP0C875 321 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 CYP2C8P10632 490 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SFNP31947 248 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 NSMFQ6X4W1 530 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SLC35F6Q8N357 371 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 USP6NLQ92738 828 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PTPRHQ9HD43 1115 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 CYP26B1Q9NR63 512 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 HDAC6Q9UBN7 1215 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 MORF4L1Q9UBU8 362 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SLC45A1Q9Y2W3 748 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PCDHA10Q9Y5I2 948 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SSU72P8A0A1W2PR75 194 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 F8VZ95 297 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 GCNT3O95395 438 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 CHRNB2P17787 502 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 GLRA2P23416 452 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 CCDC170Q8IYT3 715 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 KREMEN1Q96MU8 473 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 GABBR1Q9UBS5 961 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 SLC9A2Q9UBY0 812 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 TBX20Q9UMR3 447 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 STXBP5LQ9Y2K9 1186 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PASKQ96RG2 1323 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 LRRIQ3A6PVS8 624 aaPredicted RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 BTNL10A8MVZ5 291 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 BTBD19C9JJ37 291 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 EIF3JO75822 258 aaKnown RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 SNAI1O95863 264 aaPredicted RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 MYCLP12524 364 aaPredicted RBP7.23□□□□□ -1.25
USP46-202ENST00000451218 FMO5P49326 533 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 PTK2Q05397 1052 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 STIM1Q13586 685 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 MARCH8Q5T0T0 291 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 RASSF8Q8NHQ8 419 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 NUP58Q9BVL2 599 aa7.23□□□□□ -1.25
USP46-202ENST00000451218 DDX3XO00571 662 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP46-202ENST00000451218 TRIM49P0CI25 452 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 TRIM49CP0CI26 452 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 PRKAR2AP13861 404 aaKnown RBP7.22□□□□□ -1.25
USP46-202ENST00000451218 EIF4A3P38919 411 aaKnown RBP7.22□□□□□ -1.25
USP46-202ENST00000451218 KIF11P52732 1056 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 ARHGAP1Q07960 439 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 AMHR2Q16671 573 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 CYFIP1Q7L576 1253 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 REM2Q8IYK8 340 aaPredicted RBP7.22□□□□□ -1.25
USP46-202ENST00000451218 HELQQ8TDG4 1101 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 KAT5Q92993 513 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 CCDC34Q96HJ3 373 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 CRACR2AQ9BSW2 395 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 LZTFL1Q9NQ48 299 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 FLRT1Q9NZU1 646 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 DNAI1Q9UI46 699 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 NOCTQ9UK39 431 aaKnown RBP7.22□□□□□ -1.25
USP46-202ENST00000451218 SCN1AP35498 2009 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 PTPRDP23468 1912 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 XIRP2A4UGR9 3374 aa7.22□□□□□ -1.25
USP46-202ENST00000451218 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms