RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 FAM86B2P0C5J1 330 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 SFPQP23246 707 aaKnown RBP eCLIP7.45□□□□□ -1.22
PMS1-217ENST00000450931 PBX3P40426 434 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 METAP2P50579 478 aaKnown RBP eCLIP7.45□□□□□ -1.22
PMS1-217ENST00000450931 CLCN3P51790 818 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 PTPN14Q15678 1187 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 TYW1BQ6NUM6 668 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 GLB1LQ6UWU2 654 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 ZNF410Q86VK4 478 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 CMTR1Q8N1G2 835 aaKnown RBP7.45□□□□□ -1.22
PMS1-217ENST00000450931 RDM1Q8NG50 284 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 SMOC2Q9H3U7 446 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 EPS15L1Q9UBC2 864 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 CDH22Q9UJ99 828 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 WDR81Q562E7 1941 aa7.45□□□□□ -1.22
PMS1-217ENST00000450931 DDX39AO00148 427 aaKnown RBP7.44□□□□□ -1.22
PMS1-217ENST00000450931 ZNF623O75123 536 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 SDHBP21912 280 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 SFNP31947 248 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 CIITAP33076 1130 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 PHKA2P46019 1235 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 CLCN4P51793 760 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 TBC1D8BQ0IIM8 1120 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 FUT2Q10981 343 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 LETM2Q2VYF4 491 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 CCDC12Q8WUD4 166 aaPredicted RBP7.44□□□□□ -1.22
PMS1-217ENST00000450931 PGBD4Q96DM1 585 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 GCOM2Q9BZD3 368 aaPredicted RBP7.44□□□□□ -1.22
PMS1-217ENST00000450931 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 GABBR1Q9UBS5 961 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 CNTNAP2Q9UHC6 1331 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 C2orf16Q68DN1 1984 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 CA8P35219 290 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 JAK3P52333 1124 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 NOMO2Q5JPE7 1267 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 APOA5Q6Q788 366 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 DGLUCYQ7Z3D6 616 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 MICU3Q86XE3 530 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 GPR65Q8IYL9 337 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 SIX5Q8N196 739 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 URGCPQ8TCY9 931 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 KLHL5Q96PQ7 755 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 TBC1D13Q9NVG8 400 aa7.44□□□□□ -1.22
PMS1-217ENST00000450931 hCG_1642624A0A1W2PR95 340 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 ZC3H11AO75152 810 aaKnown RBP eCLIP7.43□□□□□ -1.22
PMS1-217ENST00000450931 GALTP07902 379 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 SRFP11831 508 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 RXRAP19793 462 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 RTN1Q16799 776 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 C12orf76Q8N812 135 aaPredicted RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 RNF169Q8NCN4 708 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 PGBD1Q96JS3 809 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 RIT2Q99578 217 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 JPH2Q9BR39 696 aaPredicted RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 HERC2P3Q9BVR0 1158 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 NRDE2Q9H7Z3 1164 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 KANSL3Q9P2N6 904 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 NID2Q14112 1375 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 FANCMQ8IYD8 2048 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 IGKV6-21A0A0C4DH24 114 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 SLC27A2O14975 620 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 PI15O43692 258 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 LILRB3O75022 631 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 MAGEA9P43362 315 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 PRKCEQ02156 737 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 ZNF528Q3MIS6 628 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 TMC5Q6UXY8 1006 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 NLRP7Q8WX94 980 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 SCLT1Q96NL6 688 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 ZMYND12Q9H0C1 365 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 WDR6Q9NNW5 1121 aaKnown RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 DLL3Q9NYJ7 618 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 ZFP37Q9Y6Q3 630 aaPredicted RBP7.43□□□□□ -1.22
PMS1-217ENST00000450931 CLUHO75153 1309 aa7.43□□□□□ -1.22
PMS1-217ENST00000450931 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 ZBTB43O43298 467 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 OFD1O75665 1012 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 WEE2P0C1S8 567 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 KLRC2P26717 231 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 DNM2P50570 870 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 PFKFB3Q16875 520 aaPredicted RBP7.42□□□□□ -1.22
PMS1-217ENST00000450931 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
PMS1-217ENST00000450931 LRRC71Q8N4P6 559 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 CCDC82Q8N4S0 544 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 CNNM3Q8NE01 707 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 EXOC6Q8TAG9 804 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 BICD2Q8TD16 824 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 RUBCNQ92622 972 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 RMDN1Q96DB5 314 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 LSG1Q9H089 658 aaKnown RBP7.42□□□□□ -1.22
PMS1-217ENST00000450931 C6orf50Q9HD87 102 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 UBN1Q9NPG3 1134 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 SLC2A4RGQ9NR83 387 aa7.42□□□□□ -1.22
PMS1-217ENST00000450931 MRPL17Q9NRX2 175 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms