RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 PCDHGC5Q9Y5F6 944 aa13.84□□□□□ -0.19
MSH5-209ENST00000450148 LINC01565O15544 149 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 TBX10O75333 385 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 CSPG5O95196 566 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 LYPLA2O95372 231 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 BAG4O95429 457 aaKnown RBP13.83□□□□□ -0.2
MSH5-209ENST00000450148 DNM2P50570 870 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 GUCY1B3Q02153 619 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 CYP4A11Q02928 519 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 ADAM15Q13444 863 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 SCLT1Q96NL6 688 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 EIF2AK1Q9BQI3 630 aaKnown RBP13.83□□□□□ -0.2
MSH5-209ENST00000450148 JPH2Q9BR39 696 aaPredicted RBP13.83□□□□□ -0.2
MSH5-209ENST00000450148 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
MSH5-209ENST00000450148 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 XPNPEP1Q9NQW7 623 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 CHST12Q9NRB3 414 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
MSH5-209ENST00000450148 FSCN2O14926 492 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 HOXA2O43364 376 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 NCK2O43639 380 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 NEMFO60524 1076 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 FGF18O76093 207 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 EOMESO95936 686 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 RFC5P40937 340 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 RBM25P49756 843 aaKnown RBP13.82□□□□□ -0.2
MSH5-209ENST00000450148 ERVFC1P60507 584 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 UBE3AQ05086 875 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 CALCRLQ16602 461 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
MSH5-209ENST00000450148 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 NLRP4Q96MN2 994 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 TTC12Q9H892 705 aaPredicted RBP13.82□□□□□ -0.2
MSH5-209ENST00000450148 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 AAASQ9NRG9 546 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 PCDHB12Q9Y5F1 795 aa13.82□□□□□ -0.2
MSH5-209ENST00000450148 MEIS3P2A8K0S8 358 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 MARCH6O60337 910 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 GLP2RO95838 553 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 LAG3P18627 525 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 SFPQP23246 707 aaKnown RBP eCLIP13.81□□□□□ -0.2
MSH5-209ENST00000450148 TXKP42681 527 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 PHKA2P46019 1235 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 PLCB3Q01970 1234 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 TRIM29Q14134 588 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 EMC2Q15006 297 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 SPOUT1Q5T280 376 aaKnown RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 TPH2Q8IWU9 490 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 LRRC43Q8N309 656 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 FBXO18Q8NFZ0 1043 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 HELQQ8TDG4 1101 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 C8orf76Q96K31 380 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 MSLNLQ96KJ4 702 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 ZSCAN31Q96LW9 406 aaPredicted RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 EPHX3Q9H6B9 360 aa13.81□□□□□ -0.2
MSH5-209ENST00000450148 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
MSH5-209ENST00000450148 POTEMA6NI47 508 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 MBTPS2O43462 519 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 GAS2O43903 313 aaKnown RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 ZNF623O75123 536 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 PBX3P40426 434 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 LAMTOR4Q0VGL1 99 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 KCNT2Q6UVM3 1135 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 EP400NLQ6ZTU2 488 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 OTUD6AQ7L8S5 288 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 SRGAP1Q7Z6B7 1085 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 EXOC8Q8IYI6 725 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 THNSL1Q8IYQ7 743 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 EFHBQ8N7U6 833 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 RNF169Q8NCN4 708 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 MRPS27Q92552 414 aaKnown RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 LPPQ93052 612 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 TLR9Q9NR96 1032 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 SH2B1Q9NRF2 756 aaPredicted RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 AGPAT5Q9NUQ2 364 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 PIN4Q9Y237 131 aaKnown RBP13.8□□□□□ -0.2
MSH5-209ENST00000450148 LZTS1Q9Y250 596 aa13.8□□□□□ -0.2
MSH5-209ENST00000450148 A0A087WWV3 80 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 MCM7P33993 719 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 NRIP1P48552 1158 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 RARRES1P49788 294 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms