RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 CWH43Q9H720 699 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 IL1RAPL2Q9NP60 686 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 SLC2A4RGQ9NR83 387 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 IL17RBQ9NRM6 502 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 EPS15L1Q9UBC2 864 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 EXOC6BQ9Y2D4 811 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
LINC01961-201ENST00000449954 LAMA5O15230 3695 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 MBLAC1A4D2B0 266 aaPredicted RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 F12P00748 615 aaPredicted RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 APPP05067 770 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 PDHBP11177 359 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 ATP5JP18859 108 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 NRLP54845 237 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 SP2Q02086 613 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 METTL7BQ6UX53 244 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 PPFIBP1Q86W92 1011 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 TRIM50Q86XT4 487 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 LRRC43Q8N309 656 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 CELF5Q8N6W0 485 aaKnown RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 RHPN1Q8TCX5 695 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 DNAJB3Q8WWF6 145 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 BOLA2Q9H3K6 86 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 SPG21Q9NZD8 308 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 ANKFY1Q9P2R3 1169 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
LINC01961-201ENST00000449954 TRPV2Q9Y5S1 764 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 IRAK3Q9Y616 596 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 KAT6AQ92794 2004 aa9.15□□□□□ -0.94
LINC01961-201ENST00000449954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 KANSL1LA0AUZ9 987 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 GPAA1O43292 621 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 NMT2O60551 498 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 TOP1P11387 765 aaKnown RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 EPCAMP16422 314 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 VARSP26640 1264 aaKnown RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 CA8P35219 290 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 PRKCQQ04759 706 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 PPARAQ07869 468 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 ZNF543Q08ER8 600 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 PPFIA1Q13136 1202 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 NEDD9Q14511 834 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 AGERQ15109 404 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 KANK3Q6NY19 840 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 CYP26C1Q6V0L0 522 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 SLC24A5Q71RS6 500 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 RSAD2Q8WXG1 361 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 APPBP2Q92624 585 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 PDCD2LQ9BRP1 358 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 DDX23Q9BUQ8 820 aaKnown RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM117Q9H0C3 514 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 TMEM161AQ9NX61 479 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 MRPL11Q9Y3B7 192 aaKnown RBP9.14□□□□□ -0.95
LINC01961-201ENST00000449954 FREM2Q5SZK8 3169 aa9.14□□□□□ -0.95
LINC01961-201ENST00000449954 KDM3AQ9Y4C1 1321 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 IGSF10Q6WRI0 2623 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 DENND3A2RUS2 1198 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 CARNS1A5YM72 827 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 N4BP1O75113 896 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 LRRN2O75325 713 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 MYCLP12524 364 aaPredicted RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 IBSPP21815 317 aaPredicted RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 RBM25P49756 843 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 GHRHRQ02643 423 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 GRIK4Q16099 956 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 GNPTABQ3T906 1256 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 ODR4Q5SWX8 454 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 GPATCH4Q5T3I0 446 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 RSPO2Q6UXX9 243 aaPredicted RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 VSIG10LQ86VR7 867 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 IFNL3Q8IZI9 196 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 SLC22A17Q8WUG5 538 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 TBC1D5Q92609 795 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 KIF1BPQ96EK5 621 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 MYL10Q9BUA6 226 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 RHOBTB2Q9BYZ6 727 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 TMX1Q9H3N1 280 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 ELAC1Q9H777 363 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 C1orf115Q9H7X2 142 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 ATP6V0A4Q9HBG4 840 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 RGS18Q9NS28 235 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 MAP3K20Q9NYL2 800 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 GMPR2Q9P2T1 348 aaKnown RBP9.13□□□□□ -0.95
LINC01961-201ENST00000449954 C2orf16Q68DN1 1984 aa9.13□□□□□ -0.95
LINC01961-201ENST00000449954 CLUHO75153 1309 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 C9IYK1 514 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
LINC01961-201ENST00000449954 TM4SF5O14894 197 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 NCAM2O15394 837 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 CXCL14O95715 111 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 SNHG28P0DPA3 235 aa9.12□□□□□ -0.95
LINC01961-201ENST00000449954 CCND2P30279 289 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms