RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TTC17Q96AE7 1141 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 MYH10P35580 1976 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 CYTH3O43739 400 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
UBE3B-204ENST00000449510 NQO1P15559 274 aaKnown RBP13.32□□□□□ -0.28
UBE3B-204ENST00000449510 CTCFP49711 727 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-204ENST00000449510 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 TMCO4Q5TGY1 634 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
UBE3B-204ENST00000449510 GDF3Q9NR23 364 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 SIK3Q9Y2K2 1263 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 AGLP35573 1532 aa13.32□□□□□ -0.28
UBE3B-204ENST00000449510 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 GYG2O15488 501 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 ORC4O43929 436 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 HSPA9P38646 679 aaKnown RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 POP1Q99575 1024 aaKnown RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 SGK1O00141 431 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 ZCCHC18P0CG32 403 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 STRN3Q13033 797 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 PROM2Q8N271 834 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 RFFLQ8WZ73 363 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 KIFAP3Q92845 792 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 PABPC3Q9H361 631 aaKnown RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 NPHS2Q9NP85 383 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 ACP6Q9NPH0 428 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 TXLNGQ9NUQ3 528 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 MAPK13O15264 365 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 UBTFL6P0CB48 400 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 PLS3P13797 630 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 CNGA1P29973 690 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 RCAN1P53805 252 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 KRT17Q04695 432 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 C12orf60Q5U649 245 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 SLC30A9Q6PML9 568 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 RAB3IL1Q8TBN0 382 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 NR2E1Q9Y466 385 aa13.31□□□□□ -0.28
UBE3B-204ENST00000449510 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-204ENST00000449510 UBAP1LF5GYI3 381 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-204ENST00000449510 COMTP21964 271 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 KCNA1Q09470 495 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 ZNF394Q53GI3 561 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 FAM102BQ5T8I3 360 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 ARMC3Q5W041 872 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SLFN13Q68D06 897 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SMYD3Q9H7B4 428 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SH3GLB2Q9NR46 395 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 PFDN1O60925 122 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CPP00450 1065 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CD19P15391 556 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SERPINB6P35237 376 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 KIF22Q14807 665 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 ANKMY2Q8IV38 441 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 FAM129AQ9BZQ8 928 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 MAD2L2Q9UI95 211 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CYP26A1O43174 497 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 RWDD2BP57060 319 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 COPS2P61201 443 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 SDCCAG8Q86SQ7 713 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CCDC89Q8N998 374 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 CCDC124Q96CT7 223 aaKnown RBP13.3□□□□□ -0.28
UBE3B-204ENST00000449510 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
UBE3B-204ENST00000449510 PODXLO00592 558 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CCNHP51946 323 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 COG7P83436 770 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 GBP7Q8N8V2 638 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CCHCR1Q8TD31 782 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 TATDN2Q93075 761 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 MXD3Q9BW11 206 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 UBN1Q9NPG3 1134 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 ZFP69BQ9UJL9 534 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 TLR2O60603 784 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 PON1P27169 355 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 YWHAGP61981 247 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBE3B-204ENST00000449510 PSMC6P62333 389 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
UBE3B-204ENST00000449510 CCDC110Q8TBZ0 833 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms