RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
LINC02561-201ENST00000449457 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
LINC02561-201ENST00000449457 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
LINC02561-201ENST00000449457 PCDHA6Q9UN73 950 aa11.33□□□□□ -0.6
LINC02561-201ENST00000449457 PCDHA8Q9Y5H6 950 aa11.33□□□□□ -0.6
LINC02561-201ENST00000449457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.32□□□□□ -0.6
LINC02561-201ENST00000449457 SMIM35A0A1B0GVV1 85 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 E7EWF7 191 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 ADAMTS3O15072 1205 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 LAG3P18627 525 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 TMEM184AQ6ZMB5 413 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 ZNF654Q8IZM8 581 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 SIX5Q8N196 739 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
LINC02561-201ENST00000449457 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 AZI2Q9H6S1 392 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
LINC02561-201ENST00000449457 NR2E1Q9Y466 385 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 PCDHB3Q9Y5E6 796 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 ZNF292O60281 2723 aa11.32□□□□□ -0.6
LINC02561-201ENST00000449457 RRN3P2A6NIE6 340 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 MEIS3P2A8K0S8 358 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 BACH1O14867 736 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 B4GALT3O60512 393 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 IGHDP01880 384 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SSBP05455 408 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
LINC02561-201ENST00000449457 ATP4AP20648 1035 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 STAT5BP51692 787 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 FOXK2Q01167 660 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 DSC3Q14574 896 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SPECC1Q5M775 1068 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 RNF19BQ6ZMZ0 732 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SLC24A5Q71RS6 500 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CATIPQ7Z7H3 387 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SCUBE3Q8IX30 993 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 PRR7Q8TB68 274 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CASP10Q92851 521 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 LPPQ93052 612 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CNTNAP3BQ96NU0 1288 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 HINFPQ9BQA5 517 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 PSTPIP2Q9H939 334 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 KDM3AQ9Y4C1 1321 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
LINC02561-201ENST00000449457 CACNA1BQ00975 2339 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 ERICH2A1L162 156 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 SMC1AQ14683 1233 aaKnown RBP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 ERMP1Q7Z2K6 904 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 DGLUCYQ7Z3D6 616 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 CCDC105Q8IYK2 499 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 UBALD2Q8IYN6 164 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 GIMAP8Q8ND71 665 aaPredicted RBP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 IGDCC4Q8TDY8 1250 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 MXRA8Q9BRK3 442 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 SPZ1Q9BXG8 430 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 TMEM117Q9H0C3 514 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 IRF2BPLQ9H1B7 796 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 AGO4Q9HCK5 861 aaKnown RBP11.3□□□□□ -0.6
LINC02561-201ENST00000449457 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
LINC02561-201ENST00000449457 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
LINC02561-201ENST00000449457 LRRN2O75325 713 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 GPR32O75388 356 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 C22orf31O95567 290 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 CXCL14O95715 111 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 EOMESO95936 686 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 DCNP07585 359 aaKnown RBP11.29□□□□□ -0.6
LINC02561-201ENST00000449457 TRDNQ13061 729 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 HDAC1Q13547 482 aaPredicted RBP11.29□□□□□ -0.6
LINC02561-201ENST00000449457 WWC2Q6AWC2 1192 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 PDXDC2PQ6P474 469 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 ECHDC2Q86YB7 292 aa11.29□□□□□ -0.6
LINC02561-201ENST00000449457 VPS52Q8N1B4 723 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms