RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 CAPSQ13938 189 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 PPP2R5AQ15172 486 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 ZC2HC1CQ53FD0 456 aaPredicted RBP16.14■□□□□ 0.17
TNF-208ENST00000449264 GDF6Q6KF10 455 aaPredicted RBP16.14■□□□□ 0.17
TNF-208ENST00000449264 RUFY4Q6ZNE9 571 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 MYOCDQ8IZQ8 938 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 ADSSL1Q8N142 457 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 NLRP4Q96MN2 994 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 MCOLN1Q9GZU1 580 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 GRIN2DO15399 1336 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.17
TNF-208ENST00000449264 MBLAC1A4D2B0 266 aaPredicted RBP16.13■□□□□ 0.17
TNF-208ENST00000449264 PSMA7O14818 248 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 PRPF6O94906 941 aaKnown RBP16.13■□□□□ 0.17
TNF-208ENST00000449264 SRGAP2CP0DJJ0 459 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 HOXC8P31273 242 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 NCKAP1LP55160 1127 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 STX17P56962 302 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 PAK1Q13153 545 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 ZNF720Q7Z2F6 126 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 LINC01465Q8N7H1 131 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 NELFBQ8WX92 580 aa16.13■□□□□ 0.17
TNF-208ENST00000449264 SIP14410 1827 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 SGPL1O95470 568 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 NAMPTP43490 491 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 ADAM17P78536 824 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 TMEM62Q0P6H9 643 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 MXD4Q14582 209 aaPredicted RBP16.12■□□□□ 0.17
TNF-208ENST00000449264 STXBP4Q6ZWJ1 553 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 HAUS6Q7Z4H7 955 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 GUF1Q8N442 669 aaKnown RBP16.12■□□□□ 0.17
TNF-208ENST00000449264 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 RNF149Q8NC42 400 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 DEPTORQ8TB45 409 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 SPIRE2Q8WWL2 714 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 SCLT1Q96NL6 688 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 CBX8Q9HC52 389 aa16.12■□□□□ 0.17
TNF-208ENST00000449264 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
TNF-208ENST00000449264 DENND3A2RUS2 1198 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 CAVIN2O95810 425 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 MAPTP10636 758 aaKnown RBP16.11■□□□□ 0.17
TNF-208ENST00000449264 KCNA1Q09470 495 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 EPM2AIP1Q7L775 607 aaPredicted RBP16.11■□□□□ 0.17
TNF-208ENST00000449264 SESTD1Q86VW0 696 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 KIAA0319LQ8IZA0 1049 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 TMEM161BQ8NDZ6 487 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 DNAJB3Q8WWF6 145 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 CRISPLD2Q9H0B8 497 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 RBSNQ9H1K0 784 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 NOD1Q9Y239 953 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 PCDHB13Q9Y5F0 798 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 UBE4BO95155 1302 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 SMIM35A0A1B0GVV1 85 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 TRIM49BA6NDI0 452 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 EIF3DO15371 548 aaKnown RBP eCLIP16.11■□□□□ 0.17
TNF-208ENST00000449264 KIF20AO95235 890 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 PPP1R2P41236 205 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 TFDP1Q14186 410 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 PTGISQ16647 500 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 COBLL1Q53SF7 1204 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 NLRP7Q8WX94 980 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 TRMT13Q9NUP7 481 aaKnown RBP16.11■□□□□ 0.17
TNF-208ENST00000449264 GINS2Q9Y248 185 aa16.11■□□□□ 0.17
TNF-208ENST00000449264 BECN2A8MW95 431 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 PPP1R37O75864 691 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 ERCC5P28715 1186 aaPredicted RBP16.1■□□□□ 0.17
TNF-208ENST00000449264 ALCAMQ13740 583 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 P2RX5Q93086 422 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 DHTKD1Q96HY7 919 aaPredicted RBP16.1■□□□□ 0.17
TNF-208ENST00000449264 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 ARHGAP28Q9P2N2 729 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
TNF-208ENST00000449264 ZMYM2Q9UBW7 1377 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 H0YCG3 227 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 ASAP2O43150 1006 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 CCNE1P24864 410 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 HOXD13P35453 343 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 GJA8P48165 433 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 GPC3P51654 580 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 PMS1P54277 932 aaKnown RBP16.09■□□□□ 0.17
TNF-208ENST00000449264 NLRP11P59045 1033 aaKnown RBP16.09■□□□□ 0.17
TNF-208ENST00000449264 GTF2BQ00403 316 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 MYL5Q02045 173 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 KIZQ2M2Z5 673 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 TAF2Q6P1X5 1199 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 ZBTB8OSQ8IWT0 167 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
TNF-208ENST00000449264 SYCP3Q8IZU3 236 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 ZNF507Q8TCN5 953 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 DIS3LQ8TF46 1054 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms